Amycolatopsis mediterranei S699: RAM_16370
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Entry
RAM_16370 CDS
T01822
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn00020
Citrate cycle (TCA cycle)
amn00190
Oxidative phosphorylation
amn00650
Butanoate metabolism
amn01100
Metabolic pathways
amn01110
Biosynthesis of secondary metabolites
amn01120
Microbial metabolism in diverse environments
amn01200
Carbon metabolism
Module
amn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amn_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RAM_16370 (sdhA)
00650 Butanoate metabolism
RAM_16370 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RAM_16370 (sdhA)
Enzymes [BR:
amn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RAM_16370 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
GIDA
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AEK41762
UniProt:
A0A9R0NW54
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Position
3475663..3477585
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AA seq
640 aa
AA seq
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MDGYRVGDPIADTKAPAGPLENRWDERKFAAKLVNPANRRRHRVIVVGTGLAGGSAGATL
AEQGYHVVQFCFQDSPRRAHSVAAQGGINAAKNYRNDGDSVYRLFHDTVKGGDFRARESN
VYRLAQVSAQIIDQAVAQGVPFAREYGGLLDTRSFGGVQVQRTFYARGQTGQQLLIGAYQ
ALSRQIDAGTVELHARTEMLDLIVADGRARGIVARDLVTGEITTHLADAVVLATGGYGNV
FYLSTNAKGSNATAIWRAHKRGAYFANPCFTQIHPTCIPRSGEHQSKLTLMSESLRNDGR
IWVPKRSGDTRSSGEIPEDERDYYLERLYPSFGNLVPRDIASRAAKNVCDAGFGVGPGGL
GVYLDFADAIARLGRPAVEARYGNLFDMYQRITAEDPYAVPMRIYPAIHYTMGGLWVDYD
LQSTIPGLFVIGEANFSDHGANRLGASALMQGLADGYFVLPATVNDYLGSTRLGDVPDAD
IRQVETEVRERISRLLAVRGTRSADSFHRELGLLMWDHCGMSRTREGLRKALDRVPELRA
EFWRDVRVPGGGAEFNQELEKANRVADFLELAELMLLDALAREESCGGHFREEHQTAEGE
ALRDDENFAFVAAWEYGAEPVLHRENLVFEHVHPTQRSYT
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggacggttaccgcgtgggcgacccgatcgccgacaccaaggcccccgccggtcccctc
gaaaaccgctgggacgagcggaagttcgccgcgaagctggtgaacccggcgaaccggcgc
cggcaccgggtgatcgtcgtgggcaccgggctggccggcggctcggccggcgcgacgctg
gccgagcagggttaccacgtcgtgcagttctgcttccaggactcgccgcggcgcgcgcac
tccgtcgcggcccagggcggcatcaacgcggcgaagaactaccgcaacgacggcgattcg
gtgtaccggctcttccacgacacggtcaagggcggcgacttccgggcccgcgagtccaat
gtgtaccggctggcccaggtctcggcgcagatcatcgaccaggccgtggcgcaaggggtg
ccgttcgcgcgggagtacggcggcctgctggacacccggtccttcggcggtgtgcaggtg
cagcggacgttctacgcgcgcggccagacgggccagcagctgctgatcggcgcgtaccag
gcgctgtcccggcagatcgacgccgggaccgtcgagctgcacgcgcgcaccgaaatgctc
gacttgatcgtcgccgacggccgggcccgcggcatcgtcgcgcgcgatctggtgaccggc
gagatcacgacgcacctcgcggacgccgtcgtgctcgcgaccggcggctacggcaacgtc
ttctacctctcgacgaacgcgaagggctccaacgccaccgcgatctggcgggcgcacaaa
cgcggcgcctacttcgcgaacccgtgcttcacccagatccacccgacgtgcatcccgcgg
tccggcgaacaccagtcgaagctgacgctgatgagcgagtcgctgcgcaacgacggccgc
atctgggtcccgaagcgcagcggcgacaccagatcatcaggggagatccccgaggacgag
cgcgactactacctcgaacgcctctacccgagcttcggcaacctcgtgccgcgggacatc
gcttcgcgggcggcgaagaacgtgtgcgacgccgggttcggcgtcggtcccggcggtctc
ggcgtctacctcgacttcgccgacgcgatcgcccgcctcggccgtccggcggtcgaagcc
cgctacggcaacctcttcgacatgtaccagcgcatcaccgcggaagacccgtacgcggtc
ccgatgcggatctacccggccatccactacacgatgggcggcctctgggtggactacgac
ctgcagagcacgatccccgggctgttcgtgatcggcgaggcgaacttctccgaccacggc
gccaaccggctcggcgcgtcggcgctcatgcaggggctcgccgacggctacttcgtgctg
cccgcgacggtcaacgactacctcggcagcacgcggctcggcgacgtccccgatgctgac
atccgccaggtggaaactgaggtgcgagaacggatttcccggctcctggccgtccggggg
acgcggtcggccgactcgttccaccgcgagctggggctgctgatgtgggaccactgcggg
atgtcccgcacccgcgaaggcctgcgcaaggcgctggaccgggtgccggagctgcgggcg
gaattctggcgtgacgtccgcgttcccggcggcggcgcggagttcaaccaggagctggaa
aaggcgaaccgggtggccgacttcctggagctggccgagctcatgctgctcgacgcgctc
gcccgcgaggaatcgtgcggcggccacttccgcgaagagcaccagaccgccgaaggcgaa
gccctgcgggacgacgagaacttcgccttcgtcgccgcgtgggagtacggcgccgagccg
gtgctgcaccgcgagaacctggttttcgagcacgtccacccgacccagcggagctacacg
tga
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