Amycolatopsis mediterranei RB: B737_1197
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Entry
B737_1197 CDS
T02804
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B737_1197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amz02000
]
B737_1197
Transporters [BR:
amz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
B737_1197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Phosphonate-bd
NPA
Motif
Other DBs
NCBI-ProteinID:
AGT81861
LinkDB
All DBs
Position
1278976..1280178
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AA seq
400 aa
AA seq
DB search
MKNRKTRLAGILGVSLLLAACGTSGSNSSAPPGAQGFTPPKLEALKALGQPEGQLNVLAW
PGYAENGSNDPKVNWVTPFEQQTGCKVNVKPFGTSDEAVTLMKTGQYDVVSASGDASLRL
VASGDAEPVNTALVPNYADVQPFLKNKSWNSVGGVSYGIPHGWGANLLTWRTDKVTPAPA
SWSVMFDANSPYKGKVIAYDSPIYLADAALYLQAHQPDLGIKNPYALDDKQFTAAVNLLK
QQRPLVSEYWSDYLKESQALKNGDAVVGTAWQVTVNLTKGEGAPLESAVPSEGATGWSDT
WMVAAKSPHKTCAYKWLDHIISPKVNAQVAEYFGEAPANTKACAEMSDKTLCDTYHAGDA
AYAAKIAYWTTPIPQCLDGRTDVKCKDYGEWTRAWTEIKG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaggaagacgcggctggccgggatcctcggcgttagcctgctgttggctgca
tgtggcacgtcgggctcgaactcgtccgcgccgccgggtgcgcaggggttcacgccgccg
aagctcgaggcgctgaaggcactcgggcagccggaaggccagctgaacgtcctggcctgg
ccggggtacgcggagaacggctcgaacgacccgaaggtgaactgggtgacgccgttcgag
cagcagaccggctgcaaggtgaacgtcaagccgttcggcacgtccgacgaggccgtcacg
ctgatgaagaccgggcagtacgacgtcgtgtccgcctccggtgacgcgtcgctgcggctc
gtcgcgtccggggacgccgagccggtgaacaccgcgctggtcccgaactacgccgacgtc
cagccgttcctgaagaacaagtcctggaacagcgtcggcggcgtctcctacggcatcccg
cacggctggggcgcgaacctgctgacctggcgcaccgacaaggtgacgccggccccggcg
tcgtggtcggtgatgttcgacgcgaactcgccttacaagggcaaggtgatcgcctacgac
tcgccgatctacctcgccgacgccgcgctgtacctgcaggcgcaccagccggacctcggc
atcaagaacccgtacgccctcgacgacaagcagttcaccgcggcggtgaacctgctcaag
cagcagcggccgctggtgtccgagtactggtcggactacctcaaggagtcgcaggcactg
aagaacggcgacgccgtcgtcggcacggcctggcaggtcacggtcaacctgaccaagggc
gaaggcgcgccgttggagtccgccgtgccgagcgaaggcgcgaccgggtggtcggacacc
tggatggtcgcggcgaagtcgccgcacaagacgtgcgcgtacaagtggctcgaccacatc
atcagcccgaaggtcaacgcccaggtcgccgagtacttcggcgaggcgccggcgaacacg
aaggcgtgcgcggagatgtcggacaagacgctctgcgacacctaccacgccggcgacgcg
gcgtacgcggcgaagatcgcgtactggaccacgccgatcccgcagtgcctcgacggccgc
acggacgtcaagtgcaaggactacggcgagtggacccgcgcctggaccgaaatcaagggc
tga
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