Amycolatopsis mediterranei RB: B737_7905
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Entry
B737_7905 CDS
T02804
Name
(GenBank) dipeptide/oligopeptide/nickel ABC transporter ATPase
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B737_7905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amz02000
]
B737_7905
Transporters [BR:
amz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
B737_7905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
nSTAND1
AAA_22
AAA_16
AAA_29
Mg_chelatase
RsgA_GTPase
AAA_19
PRK
TniB
ABC_ATPase
DnaX_C
Motif
Other DBs
NCBI-ProteinID:
AGT88566
LinkDB
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Position
8836240..8837985
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AA seq
581 aa
AA seq
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MSGSVLSISDLSVSFQTEDGVVDAVKGIGFDVQPGEIVAVVGESGSGKSVTSMSVLGLLP
KTSRIAGELRLGERNLADLKEKDMQKIRGNQVAMIFQEPMTALNPVYTVGWQLREALRSH
LDIAKDAADKRAVELLDMVGIPNPDQRFKQYPHQLSGGLRQRVVIAMAIACDPKVIIADE
PTTALDVTVQAEILGLLRKLRDTLDTAIVLITHDMGVVADMADRVIVMYQGEIVEEAPVR
ELFASPKEDYTRRLLAAVPVLGQRPEGRRLLDDTGIASDSTEAARIAEEIRLADAELEAV
IEEAAPALEIKNLVLEYPGRRGQAKNRAVDDVSLTIAKGEIVGLVGESGSGKSTVGRCAV
GLLRATQGTIAIAGKDITTMSAKEIRPLRRFFSIVFQDPASTLDPKMTIGESIAEPMVLH
KVLSGKALSARVRSLLDKVELGGHYMNRYPHELSGGQRQRVAIARALSLDPALLIADEPT
SALDVSVQARVLDLFLDLQQSLQFACLFISHDLAVVDLLADRVAVMQHGKLVEVGTRDQV
LHSPQQEYTKRLLSAAPVADPILQAERRAAWEAGKLAPVAD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggatccgtcctgtccatctccgacctcagcgtgtcgttccagaccgaggacggc
gtcgtggacgccgtcaagggcatcgggttcgacgtgcagcccggcgagatcgtcgccgtg
gtcggggagtccgggtccggcaagtccgtcacgtcgatgtcggtgctgggcctgctgccc
aagaccagccggatcgccggtgagctgcgcctcggcgagcgcaacctggcggatctcaaa
gagaaggacatgcagaagatccgcggcaaccaggtcgcgatgatcttccaggagccgatg
acggcgctgaacccggtctacacggtcggctggcagctgcgcgaggccctgcggtcccac
ctcgacatcgccaaggacgccgccgacaagcgcgcggtcgagctgctcgacatggtcggc
atcccgaacccggaccagcggttcaagcagtacccgcaccagctctcgggcggcctgcgc
cagcgcgtcgtcatcgccatggcgatcgcctgcgacccgaaggtcatcatcgccgacgag
ccgaccacggccctcgacgtcacggtccaggcggagatcctcggcctgctgcgcaagctg
cgggacaccctcgacacggcgatcgtgctgatcacccacgacatgggcgtcgtcgccgac
atggccgaccgcgtcatcgtgatgtatcagggcgagatcgtcgaagaggcgccggtgcgc
gagctgttcgcgtcgccgaaggaggactacacccggcggctgctcgccgcggtgccggtg
ctcggccagcgccccgagggccgccgcctgctcgacgacaccgggatcgcgtccgacagc
accgaggcggccaggatcgccgaggagatccggctggccgacgccgagctggaggccgtg
atcgaggaggccgccccggccctcgagatcaagaacctcgtgctcgagtacccgggccgc
cgcggtcaggccaagaaccgcgccgtcgacgacgtctcgctgaccatcgccaagggcgag
atcgtcggcctggtcggcgagtcgggctcgggcaagtcgacggtcggccgctgcgccgtc
ggcctgctgcgcgcgacccagggcacgatcgcgatcgcgggcaaggacatcacgacgatg
tcggcgaaggagatccgcccgcttcgccggttcttctcgatcgtgttccaggacccggcg
tcgacgctcgacccgaagatgacgatcggcgagtccatcgcggagccgatggtgctgcac
aaggtgctgtccggcaaggccctgtcggcgcgcgtgcgctcgctgctcgacaaggtcgag
ctgggcgggcactacatgaaccgctacccgcacgagctctccggcggccagcgccagcgc
gtggcgatcgcccgcgcgctgtcgctcgacccggcgctgctcatcgcggacgagccgacc
tcggcgctggacgtgtcggtgcaggcgcgcgtgctggacctgttcctggacctgcagcag
tcgctgcagttcgcctgcctgttcatcagccacgacctggcggtggtcgacctgctggcc
gaccgcgtcgcggtgatgcagcacggcaagctggtcgaggtcggcacgcgtgaccaggtg
ctgcactcgccgcagcaggagtacacgaagcgcctgctgtcggcggccccggtcgcggac
ccgatcctgcaggccgagcgccgcgcggcctgggaggccggcaagctggccccggtggcc
gactga
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