Arcobacter nitrofigilis: Arnit_1137
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Entry
Arnit_1137 CDS
T01235
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
ant
Arcobacter nitrofigilis
Pathway
ant03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Arnit_1137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ant03400
]
Arnit_1137
DNA repair and recombination proteins [BR:
ant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Arnit_1137
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH_2
Get2_like
Motif
Other DBs
NCBI-ProteinID:
ADG92798
UniProt:
D5V3X0
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Position
complement(1105840..1107672)
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AA seq
610 aa
AA seq
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MDLENKLKQLPNDAGVYQYFDKDGHLLYVGKAKVLKNRVKSYFKFTPELRPADKLGPRIY
KMITQVESCEWIVVPNEHDALILENSLIKQLKPKYNILLRDDKTYPYIYVDLNEDFPRLE
ITRKVLKGSNIKYFGPYSTGARDILDSIYETFPLVQKKACIKGKEACLFFQIKKCLAPCE
NRISKEEYANILNDSMEYIYNKSKLISKLKVKMQEYSDEFRFEEAMKIRDRIKTIEKSEI
KTGMDLATNDNLDIFAIKNINSKAVIVRMFIRDGKLASSSHDFLKSNVEESEEFDFEEAY
KRAIINYYSNDIPIIPKEILIGDELTDIEDVEEFLKNKFTKKINIINPKVGKKRDIVGVA
LNNCDELLRIDSTKGTNTLYEEIKELFNLSQVPNRVESYDNSHMMGQATVGAMVVWDNDK
FLKSDFRHYNLEAHDEYSQMREMLIRRVESFEKNPAPDLWIIDGGSTLLKLAYDIVESVG
VKLDIIAVAKEKIDFKAHRAKGAAKDIVHYKQGNEFKSVKLLTSDRRLHFVQRQRDEAHR
FVINFHKKQKRAEDKQISLLNIKGIGEAKVKKLLLYFGSFEKIKEASIETLKEVLNEKDS
ILISNHFNQN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggatttagaaaacaaacttaaacagcttccaaatgatgcaggtgtatatcaatacttt
gataaagatggacatttactttatgttggaaaagcaaaagttttaaaaaatagagtaaaa
tcatacttcaaatttactcccgaacttcgaccagctgataaattaggtcctagaatttat
aaaatgataactcaagtagaatcatgtgaatggattgtagtaccaaatgaacatgatgca
ctgattttagaaaactccctaataaaacaattaaaaccaaaatataatattcttctacgt
gatgataaaacttacccttatatttatgttgacttgaatgaggattttccaagattagag
attacaagaaaagttttaaaaggttcaaatataaaatattttggtccctactcaactggt
gcaagggatatattagactctatatacgaaaccttccctctcgtacaaaagaaagcatgt
ataaaaggaaaagaggcttgtttattttttcaaatcaaaaaatgtctagccccttgcgaa
aatagaatttcaaaagaagagtatgcaaatatcttaaatgactctatggaatacatctat
aacaaatcaaaacttatctcaaaactaaaagtaaaaatgcaagagtattcagatgaattt
cgttttgaagaggctatgaaaataagagatagaataaaaactatagaaaaatcagaaata
aaaactggtatggatttagccacaaatgacaacttagatatatttgctatcaaaaatatc
aactcaaaagctgtaattgtaagaatgtttataagagatggaaaactagcttcttcatcc
catgacttcttaaaatcaaatgttgaagaatcagaagagtttgattttgaagaagcatat
aaaagagctattataaactattattcaaatgatattcctattattccaaaagagatacta
ataggagatgaacttacagatattgaagatgtagaagaattcttaaaaaataagtttaca
aaaaaaataaatattatcaatcctaaagttgggaaaaagagagatatagtaggcgttgct
ttaaataactgtgatgaattattgagaatagatagtacaaaaggtacaaatacactttat
gaagagattaaagagttatttaatctctcacaagttccaaatagagttgaaagttatgat
aactcacatatgatgggtcaagcaacagttggagcaatggtagtctgggataatgacaaa
tttctaaaaagtgattttagacactataacttagaagcccatgatgaatactctcaaatg
agagagatgttaatacgaagagttgaaagttttgaaaaaaacccagcaccagatctttgg
ataatagatggtggttctactttgttaaaacttgcatacgacatagttgaatcagttggt
gtaaagttagatattatagcagttgcaaaagaaaaaattgattttaaagcacatagggca
aaaggtgctgcaaaagatattgttcattataagcaaggtaatgaattcaaatcagtcaaa
ctattaacttcagatagacgattacactttgttcaaagacaaagggatgaagcccataga
tttgttattaattttcacaaaaaacaaaaaagagcagaagataaacaaatctctttatta
aatataaaaggtattggagaagcaaaggttaaaaaactacttctttattttggaagcttt
gaaaagataaaagaagcatctattgaaactctaaaagaggttttaaatgaaaaagatagt
attctaatatcaaaccattttaatcaaaactaa
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