Alkaliphilus oremlandii: Clos_0337
Help
Entry
Clos_0337 CDS
T00607
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
aoe
Alkaliphilus oremlandii
Pathway
aoe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Clos_0337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoe03400
]
Clos_0337
Enzymes [BR:
aoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Clos_0337
DNA repair and recombination proteins [BR:
aoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Clos_0337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABW17899
UniProt:
A8ML82
LinkDB
All DBs
Position
393196..394041
Genome browser
AA seq
281 aa
AA seq
DB search
MLNIGCHLSSSKGYKAMGKDAISINANTFQFFTRNPRGSKAKAMDLKDVEGLLQLMEENK
FAKILAHAPYTLNPCSADERTREFAMEVLVDDLARMEYLPNNFYNFHPGNHLKQGVEVGI
EYIVNSLNDVLKPDQTTTVLLETMSGKGTEIGKNFEELKQIIDGIKLSNKVGVCLDTCHV
YDAGYDIVQDLDGVIQEFDRIIGLDKLYAIHLNDSKNPFASHKDRHAKIGEGYIGEEGIV
RIINHPKLRHLPFFLETPNDLEGHGEEIKMLREAYRDESIL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatataggctgtcatttatcgtcatcaaagggatataaagcaatgggaaaggat
gctatttccatcaatgcaaatacctttcagtttttcacgcgcaatcccagaggaagtaaa
gcgaaagcaatggatttaaaggatgtggagggcttgctacagttaatggaagaaaataaa
ttcgctaagatccttgcccatgcaccctataccttaaatccctgctctgccgatgagcga
accagagaatttgcaatggaggttttagtcgatgatttggcaaggatggagtatttgcca
aataacttttataactttcatccaggaaaccatctaaagcaaggcgtagaggttgggatc
gaatatattgtcaatagcctcaatgatgtattaaaaccagaccagacaacgaccgtactt
cttgaaacaatgtctggtaaggggacagaaatcggtaagaactttgaggagctaaaacaa
attatagatggaattaaactttcaaataaggttggcgtttgtctggatacctgccacgta
tacgatgctggctacgatatcgttcaagatttagatggtgttatccaggagtttgataga
atcattggcctagataaattgtatgcaattcatctcaatgatagtaaaaacccctttgca
agtcataaagatcgccatgctaaaatcggcgaaggttatattggtgaggaagggatcgta
agaataatcaatcaccctaagctgagacacttaccattttttctagagacgccaaatgat
ttagagggacatggagaagaaattaaaatgttgagagaagcatatagagatgaatctatt
ctataa
DBGET
integrated database retrieval system
