Asparagus officinalis (garden asparagus): 109840559
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Entry
109840559 CDS
T05243
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109840559
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
109840559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
109840559
NCBI-ProteinID:
XP_020264840
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All DBs
Position
5:25542052..25551293
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AA seq
656 aa
AA seq
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MADLENLLLQAAGRTGGSSSRKNQSRPHSKWRRDDVYSDGSDSNDDDSDNPKFSSKKKHS
SSQVPLKKRFDPPEKDKRGNWGGVDDDDDGRLSGDDSDSAPSVGSDLYKDEEDKEELEKM
SELDREMILAERSTKIDDYRLKKKARETSSKVEMKTRKESPPPLRGRPSLRSDKPAAKSD
ALNELRAKRMKQQDLEGYRKQRDAAGSVSFSNKDSSPAKYRSFPMPTLDSSDSEGESKGD
GKDKSPEDNEMDSLEDITGSKSDTLKYEDIKAITIRRSKLAKWFMEPFFEELIVGCFVRV
GIGKTRSGHATYRLCMVKNVDATDPDRQYKLENRITHKWLNCFWGSEXXXXRWQMAMVSD
GHPLEEEFKDWIREVERVGGRLPSLKEVNEKKEEIQKINNYVYSAATVKQMLQEKKSTAS
RPLNVAAEKDRLRKEIEVAKSRHDDAEVERIMARMKELDEISKKKDEKAVRLAEMNRKNR
AENFKNASELKPVNIALKAGEAGYDPFSRRWTRSRNYYVSKPGGENGNGAATNGGDTENA
TVVTVDGNSMAVSNGRVSGEAATVAALKAAAGAGKLVDTNAPVDQGTESNTLHDFDLPIS
LAGLQKFGGPQGLQLGFLARKQRIEATIGYKVPDNDGRRHALTLTVSDYKRRRGLL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttggagaacttgctattacaagctgcagggagaaccggaggcagttcgagt
agaaagaaccaatctcgcccacattcaaagtggcggagagatgatgtatactctgacggt
agtgactcaaatgatgatgattctgataaccctaagttctcttcgaaaaagaagcattcg
agttcacaggtccctctcaagaagaggtttgatccgccggagaaggacaagaggggtaat
tggggaggagttgacgatgatgatgacggcaggcttagtggagatgattcggatagtgct
ccgtcagttgggagtgatctatacaaagatgaggaggacaaggaagagctggagaagatg
tctgagctagatagagagatgatcttagcagagaggagtactaagattgatgactatagg
ttgaagaagaaggcaagagagacttcgtccaaggtagaaatgaaaacaagaaaggagtct
cctccccctttacgtggccggccatcccttcgatctgataagcctgcagctaaaagtgat
gccttgaacgagcttcgagccaagcgaatgaagcagcaggatttggagggttatcggaag
cagagggatgcagctggaagtgtcagtttcagtaataaggattcgtctcctgctaagtac
cggtcttttcccatgcccacccttgattcaagcgatagcgaaggagagagcaagggtgac
ggcaaagataagtcacctgaagataatgaaatggatagtttagaggacataactggatct
aaatcagacacattgaagtatgaggatatcaaagcaataactattcgtaggtcgaagctg
gcaaagtggttcatggagcctttctttgaggaattaattgttggatgctttgttcgtgtt
ggcattggaaagactcgatctggtcacgcgacatataggctctgtatggttaagaatgtg
gatgctactgatcctgataggcagtacaaattggagaaccggataacacacaagtggctc
aattgcttctggggtagtgagnnnnnnnnnnctaggtggcagatggctatggtctcggac
ggtcatccacttgaagaggaattcaaggattggattcgagaggtggaacgggttggtggc
cgtttaccaagcctaaaggaagtaaatgagaagaaagaggaaatccagaagattaacaat
tatgtatattcagctgccactgtgaagcagatgctgcaagaaaagaagtcaacggcatca
aggccgcttaatgttgctgctgagaaagatcggttgaggaaggagattgaagtggcgaag
agtcgccatgatgatgctgaggtggagaggattatggcaaggatgaaagagttggatgaa
atttccaagaagaaagatgagaaggcagtgaggttggcagagatgaataggaaaaaccga
gccgagaatttcaagaatgcatcagagttgaagccagttaacattgccttgaaagctggg
gaggcagggtatgatcctttctcaaggaggtggacaaggtcaaggaattactatgtgtca
aaaccagggggagaaaatgggaatggagcagctacaaatggaggggatactgaaaatgct
acagtggtcactgtagatgggaattccatggcagtctccaatggaagagtatccggcgag
gcagctactgttgcagctttgaaggcagcagctggtgcagggaagttggtggacacaaat
gcaccagtcgaccaagggacggagtcgaacacactgcatgactttgaccttcccatttca
ttggctggactgcagaagtttgggggtccgcaaggtttgcagctaggcttcttggctagg
aagcagaggattgaagcaacaattgggtacaaggtgcctgataatgatgggagaagacat
gccttgactttgactgttagtgactacaagcgccgaagaggtctgctttga
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