Amycolatopsis keratiniphila: AORI_6120
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Entry
AORI_6120 CDS
T02678
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aoi
Amycolatopsis keratiniphila
Pathway
aoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AORI_6120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoi03400
]
AORI_6120
Enzymes [BR:
aoi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AORI_6120
DNA repair and recombination proteins [BR:
aoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AORI_6120
Prokaryotic type
AORI_6120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGM08703
UniProt:
R4TE79
LinkDB
All DBs
Position
complement(6896578..6897255)
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AA seq
225 aa
AA seq
DB search
MTARPLQDIVEAGWAQALEPVAPQVAAMGEFLRAEIAAGRTYLPAGEHVLRAFQQPFHDV
RVLIVGQDPYPTPGHAVGLSFSVAPDVRPIPKSLINIYKEYCEDLGHPLPSNGDLTPWAD
QGVLLLNRSLTVQPGKSNSHQGKGWEAVTEQAIKALAARDEPMVAILWGRNARNLKPMLG
KVPCIESAHPSPLSAHAGFFGSRPFSRANQLLADQGAGPVDWKLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacgaccgctgcaggacatcgtcgaagcaggctgggcgcaggccctcgaaccg
gtggcgccgcaggtcgccgcgatgggggaattcctccgcgcggagatcgccgcgggccgg
acctatctcccggcgggtgaacacgtgctgcgggcgttccagcagccgttccacgacgtg
cgggtgctgatcgtcgggcaggacccgtacccgacgcccgggcacgcggtcgggctgagc
ttctcggtggcgccggacgtccggccgatcccgaagagcctgatcaacatctacaaggag
tactgcgaagacctcgggcacccgctgccgtcgaacggcgacctgacgccgtgggccgac
cagggcgtcctgctgctcaacaggtcgctgaccgtgcagccgggcaagtcgaactcgcat
cagggcaagggctgggaagcggtcaccgagcaggccatcaaggccctcgcggcgcgggac
gagccgatggtggcgatcctgtggggccgcaacgcgcggaacctgaagccgatgctgggg
aaggtgccgtgcatcgagtcggcgcacccgagcccgctttcggcgcatgccggcttcttc
gggtcgcggccgttcagccgggcgaaccagctgctggccgatcagggtgccggtcccgtg
gactggaagctcccttaa
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