KEGG   Bradyrhizobium oligotrophicum: S58_00060
Entry
S58_00060         CDS       T02484                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
aol  Bradyrhizobium oligotrophicum
Brite
KEGG Orthology (KO) [BR:aol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aol03032]
    S58_00060
   03400 DNA repair and recombination proteins [BR:aol03400]
    S58_00060
Enzymes [BR:aol01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     S58_00060
DNA replication proteins [BR:aol03032]
 Prokaryotic type
  DNA Topoisomerases
   S58_00060
DNA repair and recombination proteins [BR:aol03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      S58_00060
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3
Other DBs
NCBI-ProteinID: BAM86027
UniProt: M4Z081
LinkDB
Position
7823..10258
AA seq 811 aa
MTEPARQTIADNEPAPANEYGAESIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVD
NAIDEALAGHATAVEVMLNPDNSVTVRDDGRGIPVDIHKGEGVSAAEVIMTQLHAGGKFD
QNSYKVSGGLHGVGVSVVNALSSKLQLRVWRDDKEHLIEFAHGDAVAPLKVVGEAQGKRG
TEVTFLASPDTFKNIEYDYATLEHRLRELAFLNSGVNIVLSDMRHAVEKREEMRYDGGVE
EFVKYLDRNKKAIVPAPIMVRAEANGITVEAALWWNDSYHENVLCFTNNIPQRDGGTHLA
GFRGALTRQVNGYAESHAKKEKIALTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEV
RPVVENVLNEALAAWFEEHPGEAKTIVGKVIQAAAAREAARKARELTRKSPLSVSSLPGK
LADCQEKDPAKSELFIVEGDSAGGSAKQGRNREFQAVLPLRGKILNVERVRPDKMLSSEQ
IGTLITALGTGISDEFAIDKLRYHKIIVMTDADVDGAHIRTLLLTFFYRQMREIIDRGHL
YIAQPPLYKVTRGKSEQYLKDERALEDYLIGTGLDDCVFKSAEGEERKGRDLLGLVEEAR
IVRNVLRNLHSRYDRKVIEQAAIAGVLRPEITRDIATADAAAEYIAKRLDVLADEVERGW
VGHFVEGQGFTFERTVRGVKDVAVLDDALLASADARKLDDYAARLQEAYAKPGVLRRGEV
PTVIHGPIDLFEAVTDAGRKGIAMQRYKGLGEMNPQQLWETTLDTDARTLLQVRIKEVDE
ADDIFTKLMGDVVEPRREFIQDNSLSANVDV
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgaccgaacccgcccggcaaaccatcgccgacaacgagcctgcccccgcgaacgaatac
ggcgcagaatcgatccgggtgttgaagggcctagatgccgtgcgcaagcgcccgggcatg
tatatcggcgacaccgacgacggctccggcctgcaccacatggtctacgaagtcgtcgac
aacgcgatcgacgaggcgctcgccggtcacgccacggcggtcgaggtgatgctcaatccg
gacaactctgtcaccgtgcgcgacgacggccgcggcatcccggtcgacatccacaagggc
gaaggcgtgtccgcagccgaggtcatcatgacccagctgcacgccggcggaaagttcgac
cagaactcctacaaggtttcgggcggcctgcacggcgtcggcgtctccgtcgtcaacgcg
ctgtcgagcaagctgcagctgcgcgtctggcgcgacgacaaggagcatctcatcgagttc
gcccatggcgacgcggtggcaccgctgaaggtcgtcggcgaggcccagggcaagcgcggc
accgaggtgacgttcctcgcctccccggacaccttcaagaacatcgaatatgactatgcc
acgctcgagcatcggctgcgcgagctcgccttcctcaattccggcgtcaacatcgtgctg
tcggacatgcgtcacgcggtcgagaaacgcgaggagatgcgttacgacggcggcgtcgag
gagttcgtcaaatatctcgaccgcaacaagaaggcgatcgtgcccgcgccgatcatggtg
cgcgcggaggccaacggcatcaccgtcgaggcggcgctgtggtggaacgacagctatcat
gagaacgtgctgtgcttcaccaacaacattccgcagcgtgacggcggcacccatctcgcc
ggcttccgcggcgcgctgacgcgccaggtcaacggctatgccgagtcgcacgccaagaag
gaaaagatcgcactgaccggcgacgactgccgcgagggtctcaccgcggttctttccgtg
aaggtgccggatccgaagttctcgtcccagaccaaggacaagctggtgtcctcggaagtg
cgccccgtggtcgagaacgtgctgaacgaggcgctcgccgcctggttcgaggagcacccg
ggcgaggccaagaccatcgtcggcaaggtgatccaggccgcggccgcgcgcgaggccgcg
cgcaaggcgcgtgagctgacccgcaagagcccgctcagcgtctcgtcgctgccgggcaag
ctcgccgactgccaggaaaaggatccggccaagtccgaattgttcatcgtcgagggtgac
tccgcaggcggcagcgccaagcagggccgcaaccgcgagttccaggcggtgctgccgctg
cgcggcaagatcctcaatgtcgagcgcgtgcgcccggacaagatgctgtcgagcgagcag
atcggcaccctgatcaccgcgctcggcaccggcatcagcgacgaattcgcgatcgacaag
ctgcgctatcacaagatcatcgtgatgaccgacgccgacgtcgacggcgcccacatccgc
accctgctgctgacgttcttctaccgccagatgcgcgagatcatcgaccgcggccatctc
tacatcgcgcagccgccgctctacaaagtcacgcgtggcaagtccgagcagtacctgaag
gacgagcgcgcgctggaggactatctgatcggcaccgggctcgacgactgcgtgttcaag
agcgccgagggcgaggagcgcaagggccgcgacctgctcggactggtcgaggaggcccgc
atcgtccgcaacgtgctgcgcaatctgcacagccgctacgaccgcaaggtgatcgagcag
gccgcgattgcgggcgtgctgcggccggagatcacccgtgacatcgcgaccgcggacgcc
gcggccgaatatattgccaagcggctcgacgtgctggcggacgaggtcgagcgcggctgg
gtcggtcatttcgtcgagggccagggcttcaccttcgagcgcaccgtgcgcggcgtgaag
gacgtggccgtgctcgacgacgcgctgctcgcctcggccgacgcccgcaagctcgacgac
tatgcggcgcgcctgcaggaggcctatgccaagcccggcgtcctgcgccggggcgaggtc
ccgactgtcattcacggcccgatcgacctgttcgaggcggtgaccgatgccggccgcaag
ggcatcgcgatgcagcgctacaaaggtctcggcgagatgaacccgcagcagctctgggag
accacgctcgacaccgacgcgcgtacgcttctccaggtgaggatcaaggaggtcgacgag
gccgacgacatcttcaccaagctgatgggcgacgtcgtcgagccgcgccgcgaattcatc
caggacaactcgctgtcggccaacgtggacgtgtag

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