Bradyrhizobium oligotrophicum: S58_00900
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Entry
S58_00900 CDS
T02484
Name
(GenBank) putative helicase-exonuclease type V protein family, AddB subunit
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
aol
Bradyrhizobium oligotrophicum
Brite
KEGG Orthology (KO) [BR:
aol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aol03400
]
S58_00900
Enzymes [BR:
aol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S58_00900
DNA repair and recombination proteins [BR:
aol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
S58_00900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BAM86111
UniProt:
M4Z0T3
LinkDB
All DBs
Position
98528..101674
Genome browser
AA seq
1048 aa
AA seq
DB search
MRVFTVPISAPFLRSVIAALVDGRLVDGFEARSDPARLATATLYLPTRRSLRVAREMFLD
ELKTDAAVLPRLVALGDIDEDELAFAEDRDAFLGPAPLEIPERLDDLQRRLTLARLVAAW
AKTPVSAPLVVGGPASTLALAGDLARLIDDMVTRGVSWDALDDLVPDQLDRYWQHSLEFL
RIARTAWPAYLAEIERIEPAARRDLLIAAEAARLSAHPDGPVIAAGSTGSMPATAKFLLA
VAKLPHGAVVLPGLDTDLDEPAWSSIGGARDRGGRVLAPPAVNHPQYAMHLLLKRFGLER
RDVVRLAPTGRGGREVLISEAMRPSEATAIWHERLRQFDIAANIAEAMDNLAVVAAPNPE
MEALAIAIAMREARHLGKSAALVTPDRALARRVMAALTRWHLTFDDSGGDALLETPAGIF
ARLAAEAAARGLEPPTLLALLKHPLCRLGRAAHGWKNAIETLELALLRGTRPQAGTNGLA
RDFARFRDEHGKLHQGEASSLHRAEPRARLRPEQLDQAGALIAQLQTALAPLENLASPRP
QDFAELAARHREVLIALSSDDVGLSTAFADRDGAALARCFDDLLAPGERCGLMAPLSDYP
DLFHTAFSDRAVRRPERHGAQLQIYGPLEARLMQADRIIVGGLIEGTWPPAPRIDPWLSR
PMRHQLGLDLPERRIGLSAHDFAQLLGAPEVILTHAAKSGGAPAVASRFLHRLQAVAGTE
RWKAATARGDTYVRYAEVLDQPPAVKPIEQPAPKPPLSARPLRMSVTAIEDWLRDPYTIF
ARYILRLEALDPVDMPLSAADRGSAIHEAIGEFTQTYAEALPLHPAHALRVIGEKHFAPL
MERPEARALWWPRFQRIAGWFAAWESARREQIGAITAEIRGEIGIPLDQGRTFTLSARAD
RIEQRAEGTYAILDYKTGQPPTGKQVRMGLSPQLTLEAAILREGGFEGIPAGSLISQLVY
VRLSGNNPPGEERILELKINKSDTPQHPDQAAQEARAKLEALIRSFEDVNQGYTSLNLSM
WANRYGSYDDLARIKEWSAAGGLGVEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcttcaccgttcccatctcggccccgttcctgcgcagcgtgatcgcggcgctg
gtcgatggccggctggtcgacggcttcgaggcgcgcagcgatccggccaggctcgcgacc
gcgacgctgtatctgccgacgcggcgctcgctccgtgtcgcgcgtgaaatgttcctcgac
gagctcaagaccgacgctgcggtgctgccgcggctggtcgcgctcggcgacatcgacgag
gacgagctcgccttcgcggaggatcgcgacgccttcctcggacccgcgccgctggagatc
cccgagcggctcgacgacctgcagcgccggctcacgctggcgcggctggtggcggcctgg
gccaagacgccggtgtcggcgccgctggtcgtcggcggccccgcctcgacgcttgcattg
gccggcgacctggcgcggctgatcgacgacatggtgacgcgcggcgtctcgtgggatgcg
ctcgatgatctcgtgccggatcagctcgaccgctattggcagcattcgctcgaattcctg
cgcatcgcgcgcacggcgtggccggcctatcttgcggagatcgaacgcatcgagccggca
gcgcggcgcgatctgctcatagccgccgaagccgcgcggctgtcggcgcatcccgatggt
cccgtgattgcggcgggctcgaccggctcgatgccggcgaccgcaaaattcctgctcgcg
gtcgccaagctgccgcatggcgccgtggtgctgccgggactcgacaccgatctcgacgaa
cccgcctggtcctcgatcggcggcgcgagggatcgcggcgggcgcgtgctggcgccacca
gcggtcaaccatccgcaatatgcgatgcacctcctgctcaagcgcttcggcctggagcgg
cgcgacgtggtgcggctcgcgcccacggggcgcggcggccgcgaggtgctgatatcagag
gcgatgcggccgtccgaggcgaccgccatttggcacgagcggctgcgccagttcgacatc
gccgccaacatcgccgaagcgatggacaatctcgccgtggtcgccgcgcccaatccggag
atggaggcgctggcaattgcgatcgcgatgcgcgaggcgcgtcatctcggcaagtcggct
gcgctggtgacgcccgaccgcgccctggcgcggcgggtgatggcggcgctgacgcgctgg
cacctcaccttcgacgattccggcggtgacgcgctgctggagacaccggccggcatcttc
gcgcgcctcgccgcggaagccgcggcccgcggcctggagccgccgacattgttggcgctg
ctcaagcatccgctgtgccgccttggccgcgccgcccatggctggaagaatgcgatcgaa
acgctggagctcgctttgcttcgcggcacccgaccgcaagccggaacgaacgggctcgcg
cgcgacttcgcgcgcttccgcgacgagcacggcaagctgcaccagggcgaggcgtcgtcg
ctgcaccgtgccgaaccgcgcgcgcggctcaggcccgagcagctcgaccaggccggcgcg
ctgatcgcacagctgcagacagcgctggcgccgctggaaaatctcgcctcgccgcgcccg
caggatttcgccgagctggcggcacgccaccgcgaggtgctgatcgcgctgtcttcagac
gatgtcggcctcagcaccgcgttcgccgatcgcgacggcgcggcgctggcgcgctgcttc
gatgatctcctcgctcccggcgagcgctgcggcctgatggcgccgctgtcggactatccg
gacctgttccacaccgccttctctgaccgcgccgtgcgccgccccgagcggcatggcgcg
caactgcagatctatggcccgctcgaagcgcgcttgatgcaagccgaccgcatcatcgtc
ggcggcctgatcgagggcacatggccgccggcaccgcggatcgatccctggctcagccgc
ccgatgcggcaccagctcggcctcgatcttcccgagcgccgcatcggcctgtcggcgcat
gacttcgcgcagctgctcggcgcgcccgaggtgatcctgactcacgctgcgaaatccggc
ggcgcgccggccgtggcctcgcgcttcctgcaccggctccaggcggtggccggcaccgag
cgctggaaagccgccacggcccgtggcgatacctacgtccgctatgccgaggtgctcgac
cagcctcccgcggtgaagccgatcgagcagccggcgccgaagccgccgctctcggcacga
ccgctgcggatgtcggtcacagccatcgaggactggctgcgcgatccctacaccatcttc
gcccgctacatcctgcgcctcgaagcgctcgatcccgtcgatatgccgctgtcggcggcc
gatcgcggctcggccattcacgaggcgatcggcgagttcacgcaaacctatgccgaggcg
ctgccgctgcacccggcgcatgcgctgcgcgtgatcggcgagaagcactttgcgccgttg
atggagcgcccagaggcgcgcgcgctgtggtggccgcgcttccagcgcatcgccggctgg
ttcgccgcctgggagagcgcgcgccgcgagcagatcggtgcgatcactgcggagatccgc
ggcgagatcggcattcctctcgaccagggccgcaccttcacgctgtcggcgcgcgccgac
cgtatcgagcagcgcgccgagggcacctacgccatcctcgactacaagaccggccagccg
ccgacgggcaagcaggtgcgcatggggctgtcgccacagctgacattggaggccgcgatc
ctgcgcgagggcggcttcgagggcatcccggccggcagcctgatcagccagctggtctat
gtcaggctgtctggcaacaatccgccgggcgaagagcgcattctcgaattgaagatcaac
aagagcgatacgccgcagcacccggaccaggccgcgcaggaagcgcgcgccaagctcgaa
gcgctgatccgcagcttcgaggacgtcaatcaaggctacacctcgctgaacctgtcgatg
tgggcaaaccgctacggcagctatgacgatctcgcccgcatcaaggagtggtcggcggca
ggcggcctgggagtcgaggaatggtga
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integrated database retrieval system
