Actinobacillus pleuropneumoniae AP76 (serotype 7): APP7_1390
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Entry
APP7_1390 CDS
T00717
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
apa
Actinobacillus pleuropneumoniae AP76 (serotype 7)
Pathway
apa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APP7_1390 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apa03400
]
APP7_1390 (mfd)
Enzymes [BR:
apa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APP7_1390 (mfd)
DNA repair and recombination proteins [BR:
apa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
APP7_1390 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
Helicase_C
DEAD
ERCC3_RAD25_C
ResIII
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
ACE62042
UniProt:
B3GYB8
LinkDB
All DBs
Position
complement(1552852..1554189)
Genome browser
AA seq
445 aa
AA seq
DB search
MAEGKVDILVGTHKLLQEDVQFRDLGLLIIDEEHRFGVRQKEKIKQLRANVDILTLTATP
IPRTLNMALNGMRDLSVIASPPARRLTIKTFVRQHDDLIVKEAILREILRGGQVYYLHND
VATIENCATKLAELVPEARIVIGHGQMRERELERVMSDFYHQRFNLLVCSTIIETGIDVP
TANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKALTKDAQQRLEAISSIDN
LGAGFVLATHDLEIRGAGELLGAEQSGQIESIGFSLYMDLLENAVKALQEGREPTLEEIT
QNQVDIELRIPALLPDDYVPDVNMRLSFYKRIASAESVEALKDLKVELIDRFGLLPEATK
NLFQITQLRHLAKPLGLKKVDAGINGGYLEFKPSAQPDPMKFLQLIQSDKNVYKFEGSQK
FRFNLPLADNAERLEFVSELIEKLV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtggcggaaggcaaagtggatattctagtcggcacgcataaactgctacaagaagacgtg
caattccgagatcttggtttactcattattgatgaagaacaccgcttcggtgtgcgtcaa
aaagagaagattaaacaattacgagctaatgtcgatattctcacgctaaccgcaacgccg
attcctcgtacgctgaatatggcgttaaacggcatgcgagatctttccgttattgccagc
ccgccggcacgccgattgacgattaaaacctttgtgcgccaacatgatgatttaatcgtt
aaagaagcgattctgcgtgaaattctgcgtggcggacaggtatattacctacacaatgat
gtggcgactatcgaaaactgtgctacaaaattagcggaacttgtgccggaagctcggatt
gtgattggacacgggcaaatgcgtgaacgtgaattggaacgcgtgatgagcgatttctat
catcaacgttttaatttattggtgtgttcaaccattatcgaaaccgggattgacgtgccg
accgctaacacgattattatcgagcgtgcggataaattcggtttggcgcagttacatcaa
ttgcgtggacgtgtcggacgttctcatcatcaggcttacgcatatttattaacgccgccg
ccgaaagcactaactaaagacgctcaacagcgtttggaagcaataagttcgattgataac
ctcggtgcgggctttgtattagccactcacgatttagagattcgtggtgcgggcgaatta
ctcggtgcggaacaaagcgggcaaatcgaaagcatcggcttctcgctctatatggatctg
ctcgaaaatgcggtaaaagccttacaagaagggcgtgaaccgactttagaagaaatcacc
caaaatcaagtggatatcgagttacgcataccggcattgctaccggacgattatgtaccg
gatgtgaatatgcgtttatcgttctataaacgtatcgcctcggcagaaagtgttgaagca
ttgaaagatctgaaggtcgaattgattgaccgtttcggattattaccggaagcaacgaaa
aacctattccagatcactcagcttcgtcatttggcaaaaccgctcggcttgaagaaagtt
gatgcggggattaacggcggctatttggaatttaaaccaagcgctcaacctgatccgatg
aagttcttacaactgattcaatcggataagaacgtttataaattcgaaggatcgcaaaaa
ttccgctttaatttaccgcttgccgataatgcggaacgattggaatttgtttcggaactg
attgaaaaattggtttga
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