Candidatus Puniceispirillum marinum: SAR116_0082
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Entry
SAR116_0082 CDS
T01207
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00630
Glyoxylate and dicarboxylate metabolism
apb00680
Methane metabolism
apb01100
Metabolic pathways
apb01120
Microbial metabolism in diverse environments
apb01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAR116_0082
09102 Energy metabolism
00680 Methane metabolism
SAR116_0082
Enzymes [BR:
apb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SAR116_0082
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_8
Fer4
Fer4_10
Fer4_21
Fer2
Fer4_6
Fer4_9
Fer4_17
Fer4_2
Fer4_4
Fer4_16
Fer4_18
Fer4_15
Fer4_3
Fer4_22
PTAC
Motif
Other DBs
NCBI-ProteinID:
ADE38325
UniProt:
D5BNQ8
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All DBs
Position
complement(86346..89120)
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AA seq
924 aa
AA seq
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MTDTKTPINFILDGKDVSAEADETIWQAAARLGTDIPHLCYKDDDGYRPDGNCRACMVEI
EGERVLAASCIRAPSEGMVVNSQNHRATTARKMVMELLVSDQPARESAHDPDSELWKYAE
TQDVESGRFPARMSAEPDSSHPAIAVNMDACIQCGLCVRACREVQVNDVIGLAGRGADAH
IVFDFGDDMGASTCVGCGECVQACPTGALMPKTLLDDSQKLAITPDRHVDSVCPYCGVGC
QLTFNIKDEKIVAVSGRQGPANKSRLCVKGRYGFDYVANPERLTTPLIRRDDVAKSDSLP
FDASNPLTHFREASWEEALDLAAGKLNHVRDTYGPSAMSGFGSAKGSNEEAYLVQKLVRT
GFKTNNVDHCTRLCHASSVAALLENIGSGAVTASFSECRNSDAIIVIGSNPTVNHPVAAT
FIKNAAQKGAKLYVMDPRGQALDRYAEESLNFVPGTDVALLNGLIHVIIDEGLYDSDYVK
NQTEGFEDLKARTASSTPEAMSAICGIAPDTIRDVARGYANAKAAMIFWGMGISQHTHGT
DNSRCLISLALLTGNVGKPGAGLHPLRGQNNVQGASDAGLIPMFFPDYKPVGDPEIRAKY
ENLWNAKLDPEKGLTVVEITDAAYNGDIKAMYVMGENPAMSDPDQAHARAALANLDILVV
QDIFMTETAAFADVILPASAFPEKNGTFTNTDRRVQMGRQAIDPPGDARQDWWIIQELAN
RMGLSWSYTHARDIFGEMRMVMPSLTGITWDRLLKEDAVTYPCADENSEGKDVIFGDGFP
TASGRGRMTPADVLPPDEMPDAEFPLVMSTGRLLEHWHTGSMTRRATVLDALEPEPEVHV
SPSDLQSLQVSAGDLIRVVTRRGEIALAARVDPKLPAGMIFVPFCFNEAPANMLTNPALD
PYGKIPELKFSAARLETVVEAAAE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgactgatacgaaaacaccgattaattttattctcgatggcaaggatgttagcgccgaa
gctgacgaaaccatatggcaggctgcggcacgccttggcactgatattccgcatctatgt
tacaaagatgatgatggctaccgccctgatggcaattgtcgggcctgtatggttgaaatt
gagggtgaacgggtcttggcggcatcatgtatccgcgccccaagcgaaggcatggtggta
aacagccagaaccaccgcgccaccacggcacgtaaaatggtcatggaattgcttgtttcc
gatcaacctgcgcgtgaatctgcgcatgatccggattccgaattgtggaaatatgccgaa
acacaggacgttgaaagcggccgttttccagcgcgcatgtcagccgaacctgatagttca
catccagctattgccgtcaatatggacgcttgcatccaatgcggcttgtgcgttcgcgcc
tgccgcgaagtgcaggtcaatgatgtgatcggcttggctggtcgcggtgctgatgcgcat
atcgtgtttgattttggtgatgatatgggtgccagcacctgtgtgggttgtggtgaatgt
gttcaggcctgtccaacaggtgccctgatgcccaaaaccctgcttgatgacagccagaag
ctggcaatcacgcctgaccgccatgtcgattccgtgtgtccttattgcggtgttggctgt
cagctaacattcaatatcaaagatgaaaaaatcgtggctgtttcgggtcgtcaaggccca
gccaataaaagtcggctttgtgtcaaaggccgttatggtttcgattatgttgccaatccg
gaacgcctgacaacgcccctgatccgccgcgatgatgttgccaagtcagactccctgccc
tttgacgccagcaatccactcacccatttccgcgaagcaagttgggaagaagcacttgat
cttgccgcgggcaaactcaatcatgtgcgtgacacctatggtccatcagccatgtcgggc
tttggttcggccaagggtagtaatgaagaagcctatctcgtgcaaaagcttgtacgtact
ggctttaagaccaataatgtcgatcactgcacacggttgtgtcatgcgtcatcggtcgct
gctttgctggaaaatattggttctggtgctgtcaccgcctccttttccgaatgtcgcaat
tcagatgccattatcgtgatcggctcaaacccgacagtgaaccatccggttgccgcgacc
tttatcaagaacgctgcccaaaagggtgccaagctttatgtcatggatccccgcggtcag
gcacttgaccgctatgccgaagaatcactgaattttgttccgggcactgatgtggcgctg
ttgaacggtctgattcatgtcattatcgacgaaggcctctatgatagtgattatgtcaaa
aatcaaaccgaaggttttgaagacctgaaagcccgtaccgccagttcaacgcctgaggct
atgtcggccatttgtggtattgcgcccgacacaatccgcgacgtggcacgtggctatgcc
aatgccaaagccgcgatgattttctggggcatgggcatctcacagcatacgcatggcact
gacaattcacgctgtttgatttcgctggccttattgacaggcaatgttggcaagcccggc
gctggtctgcatccgcttcgtggccagaataacgttcagggcgcatctgacgcgggtctg
atcccgatgttcttccctgattacaagcctgttggcgaccctgaaatccgcgctaaatac
gaaaatctatggaacgccaagctggatccggaaaaaggccttaccgtcgttgaaattacc
gacgccgcctataatggtgacatcaaggcgatgtatgtgatgggcgaaaatccggccatg
tcggatcctgatcaggcgcatgcccgcgcggcgctggcgaatctggatattctggttgtg
caggacatcttcatgaccgaaacggccgcttttgccgatgtaatcctgcctgcttcggcc
tttccggaaaagaatggtacctttaccaacactgaccgccgcgtgcagatggggcgtcag
gcgatcgacccaccaggcgacgctagacaggattggtggatcattcaggaacttgccaac
cgcatgggcctaagctggagctatacacatgcccgggatatttttggcgaaatgcgcatg
gttatgccgtctttgactggcattacatgggatcgcttgctcaaggaagatgccgttacc
tacccatgtgctgatgaaaacagcgaaggcaaggatgtgatcttcggcgatggtttcccg
accgcgtcgggacgcggacggatgacaccggcagatgtattgccgcctgatgaaatgcct
gatgctgaatttccgcttgtgatgtccaccggacgtctgctggaacattggcataccggt
tcgatgacaaggcgggcaaccgttcttgacgccctcgagccagagccagaggtacatgtc
tcaccatctgatctgcaatcattacaggtatcggctggtgatctgatccgtgtcgtgacg
cgtcgtggtgaaattgcgctggctgcccgggttgacccgaaactgcctgcgggtatgatc
ttcgttcctttctgctttaacgaagcccctgccaacatgctgacgaatccggcgcttgac
ccatatggcaagatccccgaattgaaattttcggccgcaaggcttgaaacagtggtcgaa
gctgcggcagaatag
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