Candidatus Puniceispirillum marinum: SAR116_1118
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Entry
SAR116_1118 CDS
T01207
Name
(GenBank) putative protoheme IX farnesyltransferase (heme o synthase)
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00190
Oxidative phosphorylation
apb00860
Porphyrin metabolism
apb01100
Metabolic pathways
apb01110
Biosynthesis of secondary metabolites
apb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
SAR116_1118
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SAR116_1118
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
apb01006
]
SAR116_1118
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
apb03029
]
SAR116_1118
Enzymes [BR:
apb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
SAR116_1118
Prenyltransferases [BR:
apb01006
]
Compound prenylation
Protoheme farnesyltransferase
SAR116_1118
Mitochondrial biogenesis [BR:
apb03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
SAR116_1118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
ADE39361
UniProt:
D5BSW4
LinkDB
All DBs
Position
complement(1193071..1193991)
Genome browser
AA seq
306 aa
AA seq
DB search
MSVTSDHQIASPADGFSGPSVGDFWALLKPRVMSLVIFTGFAGMYLAPGTLHPLVFGISL
FAIAAGAGASGAINQWYDRDIDAVMSRTKSRPIPAGVMIPAEALTLGLVVSAFSVLLLGL
AANWLAAGLLAFTIFFYAVIYTVWLKRSTPQNIVIGGAAGALPPVIGWAAVTGGVSIEPI
LLFAIIFIWTPPHFWALALVKNDDYKAAGVPMLPVVAGEDETRKQILIYAVLLAPLAVIP
SFIGMASWVYGAFAAVAGAIFIAMSWRIWASKSNVLAMRLFAYSIIYLFLIFLGLVLDHF
VTGSVL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcacatcggatcatcaaattgcgtcacctgccgacggctttagcgggccgtcg
gttggcgacttctgggcgttgttaaagccccgggttatgagcctggtgatttttaccggc
tttgcgggtatgtatctggcacctggaacattgcacccacttgtttttgggatctcttta
tttgccattgctgcgggtgctggtgcctctggtgctatcaaccaatggtatgaccgtgac
attgatgcggttatgtcgcgtacaaaaagccgtccaattccggcaggggttatgatccct
gctgaagccttgacattaggccttgttgtatcagcgttttcggtcttgttgcttggcctt
gcggcaaactggcttgcggcggggttgcttgccttcacgatctttttttatgccgttatc
tatacggtatggctgaaacgaagcaccccgcagaatattgtcattggcggtgcggctggt
gctttgccccccgtcattgggtgggccgcggttacgggtggtgtttcaatcgagccaatc
ctgctttttgccattatctttatctggacgccgcctcatttctgggctttggcgctggtt
aaaaacgatgattataaagcggctggcgtgccgatgttaccggttgtggcgggtgaagac
gaaacccgtaaacagatactgatctatgcggtgctactggcgcctttggcagtgatcccg
tcctttattggtatggcgtcatgggtttatggtgcgtttgctgccgtggctggcgctata
tttattgccatgtcatggcgtatctgggccagcaaaagcaatgttcttgcgatgcgcctg
tttgcctattcaatcatctatctgtttctgattttccttggtttggtgcttgatcacttt
gtgacaggttcggtgctatga
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