Candidatus Puniceispirillum marinum: SAR116_1524
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Entry
SAR116_1524 CDS
T01207
Name
(GenBank) Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAR116_1524
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apb02000
]
SAR116_1524
Transporters [BR:
apb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SAR116_1524
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
Rad17
SMC_N
nSTAND1
AAA_16
PRK
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADE39767
UniProt:
D5BU20
LinkDB
All DBs
Position
complement(1685234..1686253)
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AA seq
339 aa
AA seq
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MDILSLENVSQEFFLPRKLGDIVTRKPARSIRAVQAMNLAIHENEILGIAGESGCGKSTT
CLIAAGLLSPTDGVVVHRGQSLAAMDDVAKKIFRRSVQIIFQDPYESLNPRFQIGDAVAE
GPRALQLWPEDVIQDKVRSILHSVGLDPDRFMKRFPHELSGGERQRVGIAAALVMEPDIV
FADEPLSMLDVSIRADILALIKTLAAERKFSCVYVSHDLSILGNVADRIMIMYLGQAVEI
GSAKDVLTNPKHPYTKALISAVPIPDPTIERGIPKIIGDLSMPVNTHQGCQFAPRCPYAK
DACWQSFKPLSEAQALHQSSCLRETDADVLNEVVDADRG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctaagcctcgaaaatgtatcgcaggaatttttcctgccacgtaagcttggt
gatattgtcacccgcaaaccagcgcgaagtattcgtgctgtacaggcgatgaatttggca
atccatgagaatgaaattcttggtattgctggtgaatctggctgtggaaaatccacaacc
tgcttgattgcagctggtttgctatccccgactgatggtgttgttgtccatcgtggtcag
tcattagcggcaatggatgacgtggccaaaaagatatttcgtcgttcggttcagatcatt
tttcaagatccctatgagtctctcaatccgcgtttccagataggtgatgcggttgctgaa
gggccgcgggcgttgcaactttggcctgaagatgtgattcaggataaggtgcgttcaatt
cttcactctgtaggtcttgaccccgatcgttttatgaaaagattcccgcatgagcttagt
ggcggcgagcgtcagcgggttggtattgcggcagcattagtcatggagccagacattgtt
tttgctgatgagccattatcgatgcttgatgtgtcaatcagggctgacatcttagcgctg
atcaaaacattggctgctgagcgtaagttttcatgtgtatatgtttcgcatgatttgtct
attctgggcaatgttgctgaccggatcatgattatgtatcttgggcaggctgtcgaaata
ggctcggccaaagatgttctaaccaatcctaaacacccttatacgaaagcgctgatttcg
gcggtgccgattcctgatcccactattgaacgcgggataccaaagattattggtgatctg
tcgatgccggtgaacacgcatcagggatgtcaattcgcacctcggtgcccctatgcaaaa
gatgcatgctggcaaagtttcaagccactgagtgaagcacaagcgctgcatcagtcatcg
tgtttgcgtgagacagatgctgatgtccttaacgaggttgttgatgcggacagaggctga
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