Acyrthosiphon pisum (pea aphid): 100169309
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Entry
100169309 CDS
T01076
Name
(RefSeq) DNA repair protein RAD50 isoform X1
Organism
api
Acyrthosiphon pisum (pea aphid)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_15
Mst1_SARAH
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
100169309
NCBI-ProteinID:
XP_016660491
APHIDBASE:
ACYPI009938
UniProt:
A0A8R2NR72
LinkDB
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Position
A1:111343697..111373032
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AA seq
1305 aa
AA seq
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MKMSTLESISIQGIRSYHPDEKQTLKFYKPLTLILGQNGCGKTTIIECLKYITCSDLPRN
ANKGGFVWDPKLSDHHTVKGNVKLSFHDTKDTRVVVSKTLESTQKLATVSTKSLDQTISR
KGQSTSHKCADLDDVMCTYLGVSKSILKDVVFCHQEDSNWPLDEDKKVKEKFDSIFDVGK
YDKCIKQIQIEIKATQADKRTCNNNIQHFWKYREEARNKRATLENKKFSFDELQQKLNSI
DKEIIPLEERYKEIMKKEEHFFSLKNKLLTSEGNLNSIRLAIKDLKLLIKLEFKGNDSDL
DEELKNFNNNLVQKEKDKYKLNCLKNDAITNENKIQENMSKEQVNLGRYQSEEKQNLNNI
NKQNAKIIELGNEMQFNLPDLTEYNRVQVISNLSNNLSSMNDKLESTQKEHREIENKLQS
NIDSIRVEKAKLDQEIKIKEKQILENTSEIQKLKKDIDQVRNSAEKLSALQKSKVDIETK
LNILRGSLNVDDVKKDINKKKDEKYEQNIKLEVIEKEVQKLQLLSIVQAELDTVILNKTG
IDNKLKILKNKVNDVLKDLLGFIPQEKLKFEFTSFLDKLSDTIRCNRKSIAEKQKQLTTL
EANYNHTKEKLRTKQIELSNDENALSDMCQGQEYETILKEVNEKVEELQAQKGSVSTSGH
LFRRYIKNLEAQDPSCPLCHRCFGSIDEVTELINDLNMRVHKIPSELETTIAQLETLLKK
QSKLQQLRPTYTRISVLKQTEIPNLKDELERISSNLRKCRDELTKLSDENGKLETNETNA
KNIQSDIIMIDSFDNDVKRYSKEEQRLTTKMTESGSIRNLQEAISERNALKSTINEICNV
LEKKQYELNEYTEMLHNLQTQQNKITSDELNIKSKMQDEKSVIDKLNDLQNLEATISLEL
DSARETLGPIQEKLDTCINTFEQTKKQQSRKIENNRKEIIILEKKIQEINNLQSSIDNYE
KKEWTLRIKETNNLLNNLNKEKMNYIEEQKNLQKQIDSINEYNANQEVKKIDLENNKKLR
QKSKEEIECLSEINKFHEDFGTMDVNSLLSEKSTNTKQRQALAEEKNKSLGRKQELDNII
RHITEELTAIHFKNAENIYLHEKVQLEILNRVEKDLTKYNKALEWAMNRFHKERMQSINT
IIKKLWRDIYTGNDIDYIQIKTSSDDKPIQTDTIKKRVFNYRVVQIKNEVELDMRGRCSA
GQKVLACLIVRMALAETFSKNCGILALDEPTTNLDESNIQSLAESLSEIITRRSSQKSFQ
LLIITHDPNFLRKLSARDMVDTYYEVKRSNEGMSIVCEQDIKFLP
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtctacattagaatcaatatcaattcaaggtataagaagttatcatccagat
gaaaaacaaactttaaaattctataaacccctaacattgattttggggcaaaatggttgt
ggaaaaactactataattgagtgtctaaaatatattacatgttcagatctaccgagaaat
gcaaataaaggaggttttgtttgggatcctaaactatcagatcatcatactgttaaaggc
aatgtaaaactatcatttcatgatactaaagatactcgtgtagtggtgtcaaagactttg
gaatctactcaaaagttagcaactgtgtctacaaaatcgctcgatcaaacaatttctaga
aaaggtcagagtacttcacacaaatgtgctgatcttgatgatgttatgtgcacttatttg
ggtgtttcaaaatcaattttaaaagacgtggttttttgtcatcaagaagattctaattgg
cctttagatgaagataagaaggtaaaagaaaaatttgattcaatatttgatgttggaaaa
tatgacaaatgtattaaacaaattcaaatagaaataaaggctactcaggcagataaaagg
acatgcaacaataatatacaacatttttggaaatatagagaagaagcacgtaacaaaaga
gcaacccttgaaaataaaaaatttagttttgatgaactgcagcagaaactgaatagtatt
gacaaagaaataattccattagaagaaagatacaaagaaattatgaaaaaagaagaacat
tttttttctctaaaaaataaattattaacttctgaaggaaatctgaactctattagatta
gctataaaggatttgaaattattgattaagctagagtttaaaggaaatgactctgatctt
gatgaagaactaaaaaattttaataataatttggttcaaaaagaaaaagataaatataaa
ttaaattgtctaaaaaatgatgcaattactaatgaaaataaaattcaagaaaatatgagc
aaagaacaagtaaatttaggaagatatcaaagtgaagaaaaacaaaacctaaacaatata
aataaacaaaatgcaaaaataattgaattaggaaacgaaatgcagtttaatttgccagat
ttaactgagtacaatcgtgtacaggtgataagtaatctgtcaaataacctaagttctatg
aacgataaattagaatctacacaaaaagaacatagagaaattgaaaataagttgcaatca
aatattgattcaattagagtagaaaaggctaagttagatcaagaaattaaaatcaaagaa
aaacaaattttggaaaatacttctgaaattcaaaaacttaaaaaagatattgatcaagta
agaaattctgctgaaaagttatcggctctacaaaaatcaaaagttgatattgaaacaaaa
ttaaatattctcaggggttctttaaatgttgatgatgttaaaaaagatataaataagaaa
aaggatgaaaaatatgaacaaaatataaaactagaagttatagaaaaagaagtacaaaag
ttgcagttattaagtattgtacaagcagaacttgacactgttatattaaacaaaactgga
atcgataataaacttaaaatacttaaaaacaaagtgaatgatgtgttaaaagatctactt
ggatttataccacaggaaaaactcaaatttgagtttacatcatttttagataaattatct
gatacaatcagatgcaatcgaaaaagtatagctgaaaaacagaaacagttaactacacta
gaagctaattataaccacactaaagaaaaattgcgtacaaaacaaatagagctttccaat
gatgagaatgctttaagtgatatgtgtcaaggtcaagaatatgaaacaatattaaaagaa
gtcaatgaaaaagtggaagaattgcaagctcaaaaaggttctgtgtcaacttctggtcat
ctttttaggcgatacataaaaaatttggaagctcaggatcctagctgtccattatgtcat
cgatgctttggttctattgatgaagtgactgaattgattaatgatctaaatatgagagtc
cacaaaattccaagtgaattagagacaacaattgcacaattggaaacgcttttaaaaaaa
caatcaaaacttcaacaattaagacctacttacactcgaatatcagttttgaaacagaca
gaaatacctaatctcaaagatgaacttgaacgtataagtagtaatttaagaaagtgtcgt
gatgaactaacgaaattatcagatgaaaatggaaaactagaaactaacgaaacaaatgca
aaaaatatccaatctgatataataatgattgatagttttgataacgatgttaaacgatat
tcaaaagaagagcagcgtttaacaacaaaaatgactgaatctggttccattaggaatctt
caagaagcaatttctgaaaggaatgctttgaaaagcactataaatgaaatttgcaatgtt
ttagaaaaaaaacagtatgaattaaacgaatatactgaaatgttacataatttacaaacg
caacaaaataaaattactagtgatgaattaaatataaaaagtaaaatgcaagatgaaaag
agcgtaatagacaaattgaacgatttacagaatcttgaagcaacaataagtttagaattg
gatagtgccagagaaacattaggaccaatacaagagaagttggatacatgtattaatact
tttgaacaaacaaaaaaacaacaaagcagaaaaattgaaaataatagaaaagaaataatt
attcttgaaaaaaaaattcaagaaataaataacttacagtcttcaattgataattatgaa
aaaaaagaatggactctgcgcattaaggaaacaaataatttattgaataatctcaataaa
gagaaaatgaattacatcgaagaacagaaaaacttacaaaaacaaattgattctattaat
gaatataatgccaatcaagaggttaaaaaaatagacttggaaaacaataaaaaattaagg
caaaaatcaaaagaagaaattgaatgtttatctgaaataaacaaatttcatgaagatttt
ggaactatggatgtgaacagtttgttaagtgaaaaatcgaccaacacaaaacaacgtcaa
gctttagctgaggagaaaaataaatctcttggtagaaaacaagagctggataatatcatt
aggcatattacagaagagttgacagctattcatttcaaaaatgccgaaaacatatattta
catgaaaaagtgcagttagaaatattaaatcgtgttgaaaaagatctgacaaagtacaac
aaagctcttgaatgggcaatgaataggtttcataaagaacgaatgcaaagtattaatact
attattaaaaaattatggagagatatttatactggaaacgacattgactatattcaaata
aaaacatcttctgatgataaaccaatacaaacagatacaattaagaaaagggtcttcaac
tatagagttgtacagataaagaatgaagttgaattggatatgcgtggaagatgcagtgca
ggccaaaaagttttggcgtgcctaattgtcagaatggcattagcagaaacattcagtaaa
aattgtggtatactagcactagatgagcctacaacaaatttagatgaatctaacattcaa
agcttagcggaatcattatctgaaattataacacgtcgcagttctcaaaaatcattccaa
ttactcatcattactcatgatccaaattttttacgtaaattatctgctagagatatggtt
gatacatattatgaagtgaaaagaagtaacgagggaatgtccattgtgtgtgaacaagat
attaaattcttaccctaa
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