KEGG   Anas platyrhynchos (mallard): 101792783
Entry
101792783         CDS       T02816                                 
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101792783 (THOC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    101792783 (THOC5)
   03041 Spliceosome [BR:apla03041]
    101792783 (THOC5)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101792783 (THOC5)
Spliceosome [BR:apla03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101792783 (THOC5)
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 101792783
NCBI-ProteinID: XP_038043535
Ensembl: ENSAPLG00000005801
EnsemblRapid: ENSAPLG00030015108
LinkDB
Position
16:5752106..5768474
AA seq 694 aa
MASDAGKKRKPKVIRTDGATPEGKRGKAEGEQDARYYSEECEVDLRDPIKDYELYKETCQ
ELQRLMAEIQELKSRGIKDNASEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYSEAPTEISRPDITL
TEPHQQTLARLDWELEQRKRLAERYKECLTIKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDVEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLCVTIDIKCKAQSSF
PSLLAQTDNVLHLTFYYLMNLNVMTVKAKVTTAVEMTTAISAGDLLSPDSLLSCLYPGDH
GKKTPNPANQFQFDKVGIVTLSDYVTELGHPYVWVQKLGGLHFPKEQPQHTVTADNSLSA
SHMELTVKLLRTRLQSRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWSAIPFED
YAELPYTKDVVEAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSALPPIFSLCLNWKGE
RTGNNDDNIRAMESEVNVCYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDTSVEGP
KEFPQEKMCLRLVRGPMRLKPFKFNFPQGFFSHR
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggcctcggacgccggcaagaagcggaaacccaaagtgatccgcaccgacggggccacg
cccgagggcaagcgcggcaaggcggagggcgagcaggatgcccggtactacagcgaggag
tgcgaggtggacctgcgggaccccatcaaggactacgagctgtacaaggagacctgccag
gagctgcagcgcctcatggccgagatccaggagctgaagagccgcggcatcaaggacaac
gcctccgagatcgacgagcggcgcgtgcagagctgcgtgcacttcatgaccctgaagaag
ctgaaccgcctggcgcacatccgcctgaagaaggggcgagaccagacccacgaggcgaag
cagaaggtggacgcctaccacctgcagctccagaacctgctgtacgaggtgatgcacctg
cagaaagagatcaccaagtgcctggagttcaagtcgaagcacgaggagatcgagctggtc
agcctggaggagttctacagcgaggcccccaccgaaatcagccggccggacatcaccctg
accgagccccaccagcagaccctcgcccgcctcgactgggagctggagcagcgcaagagg
ctggcagagaggtacaaggaatgcctgaccatcaaggaaaagatcctgaaggagatcgag
gtgaagaaggagtacctgagcagcctgcagcctcgcctcaacagcatcatgcaggcctcc
ctgcccgtgcaggagtacctcttcatgcccttcgaccaggcgcacaagcagtacgagaca
gcccgccacctgccaccgcccctctacgtcctcttcgtccaagccagcgcctacgggcag
gcctgcgacaagaagctcgtggtggctatcgaaggcagcgtggaggaagccaaagccctg
tacaagccgcccgaggactcgcaggatgacgagagcgactcggacgtggaggaggagcag
accacgaagcggcgccggcccacgctgggcgtgcagctggacgacaagcgcaaggagatg
ctgaagcggcacccgctgtgcgtcaccatcgacatcaagtgtaaagcacaaagcagtttc
ccttctttgttggcacagactgacaacgtgctgcacctgaccttctactacctgatgaac
ctcaacgtcatgacggtgaaggccaaggtgaccactgccgtcgagatgacgactgccatc
agcgctggcgacctgctgtccccggactccctcctgagctgcctgtacccgggagaccac
gggaagaagacccccaaccccgccaaccagttccagttcgacaaagtgggcatcgtcacc
ttgagtgactacgtgacggagctggggcacccctacgtgtgggtgcagaagctgggcggc
ctgcacttccccaaggagcagcctcagcacacggtcaccgccgacaactcgctgagtgcc
agccacatggagctgacggtgaagctgctgcggacgaggctgcagtcccgcctggccctg
cacaagcagtttgcctctctggagcacggcgtggtgccggtctccagcgagtgccagcat
ctcttccccaccaagatcgtctcgcgcctggtgaagtggagcgccatccccttcgaggac
tacgcggagctgccctacactaaagatgtggtggaggccggcctggccgaggacacgcac
ctctattacatggccctgatagaaaggggcacagccaagctccaggccgctgtggtcctg
aaccccggctactccgcgttgccacccatcttcagcctctgcctcaactggaaaggagag
cgaaccggcaacaacgacgacaacattcgggcgatggagagcgaggtcaacgtgtgctac
aaggagctgtgggggcccaaacccggctaccagctcctcaccaaccagctgcagcgcctc
tgcatggtgctggacgtctacctggagaccgagccccacgacaccagcgtggaggggccc
aaggagtttccccaggagaaaatgtgtctgcgcctggtcaggggccccatgcgcttgaag
cccttcaagttcaacttcccgcagggcttcttcagccaccgctga

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