KEGG   Anas platyrhynchos (mallard): 101804830Help
Entry
101804830         CDS       T02816                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
apla  Anas platyrhynchos (mallard)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:apla00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    101804830 (LIG4)
Enzymes [BR:apla01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101804830 (LIG4)
DNA repair and recombination proteins [BR:apla03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     101804830 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 903 aa AA seqDB search
MTSSVPRLHEEVHKPSLRCPSYGKKQTRPEKTKYFKDFLDSWRKFHHALHQKEKDVTDSF
YPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTPAGSRGDAGD
FAMIAYFVLKPRSPKRGRLTVEQVNELLDAIANNNAARNKGQLKKSLLQLITQSTALEQK
WLIRMIIKDLKLGISQQTIFSIFHPDAVELHNVTTDLEKVCRQLHDPTVSLSDVSITLFS
AFKPMLAAIADVQQIEKQMNNQTFYIETKLDGERIQMHKDGDVYKYFSRNGFDYTQQFGA
SPLDGSLTPFIHKVFKDNIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMVEDSDLQTCF
CVFDVLMVNDQKLGHEALSKRYEILSNVFTPVTGRIHVVHKKTARTRKEVIDALNEAIDN
REEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGLRGGMMSHFL
CAIAETPAPNEKPTVFHSICRIGSGYTMKELHDLGLKLAKHWKPYHRRDPPCNILCGIEK
PEVYIEPCNSVIVQVKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMTLDMLADLRS
RAEGKLASKHLHIDEYDEPQEKKRKTVSKVKKVIGIAEQFKAPDLSNVNKVSNVFEDVEF
CVMTGTGKHSKSELESRIAECGGSVVQNPGPDTYCVIAGAENVRVKNIIASNKYDVVKAE
WLLQCFQSKMLVPWQPAVMIHMSPDTKEHFAREYDCYGDSYTADTDVAQLKEVFSRMKDN
KIMPLDVIAELEERYSWNSCQLSIFRGNTIYVDCYAVVNEPRTKIHGTRLSIRALELRFY
GAKVVSCLEEGVSHVIIGEDHSRVEEMKALRRTFGKKFKIVSELWVTESVKEGVPKNENQ
YLI
NT seq 2712 nt NT seq  +upstreamnt  +downstreamnt
atgactagttctgttcctagactacatgaagaagtccataagccatccttaagatgtccc
agctatggcaagaagcagacccggccagagaaaaccaagtacttcaaggacttcctggac
tcgtggagaaagttccaccacgctcttcaccagaaggagaaggacgtcaccgattcgttt
tatccggccatgcggctcattctcccgcagctcgagagggagaggatggcgtacgggatt
aaggaaaccatgctcgccaagctgtacatcgagctgctcaatttgcccaaagatgggaag
gatgctgcgaagcttttaaactacaggacgcctgccggttcgcgtggggatgctggagac
tttgccatgattgcatactttgtcttaaaacctaggagccccaaacgaggcaggctgaca
gtggaacaggtcaacgaactgttagatgccatagctaacaataatgctgctagaaacaag
gggcagttaaagaaaagccttcttcagttaattacccagagcacagcgcttgagcaaaag
tggctcatccggatgattataaaggatctgaaactgggtattagtcaacaaactatattt
tccatttttcatcccgatgctgttgaattacacaatgtcacgacagatttggaaaaagtt
tgtagacaactgcatgatcccactgtctcacttagcgatgtttctatcacgttattttct
gcctttaagccgatgcttgctgctattgccgatgtccagcaaattgagaaacaaatgaat
aaccagacattctacatagaaactaaactggatggtgaacgtatacagatgcacaaagat
ggtgatgtgtataaatatttttccagaaatgggtttgactatactcagcagtttggtgct
tccccccttgatggctcattaacaccatttattcataaagtatttaaagacaacatacaa
aattgcattcttgatggcgaaatgatggcttacaatcctgagacacaaaccttcatgcaa
aaaggaaacaaatttgacataaaacgaatggtggaggactctgatctgcagacctgcttc
tgtgtgtttgatgtgctgatggttaatgatcagaagttgggtcatgaagcactgagcaaa
aggtacgagatcttaagcaatgtatttaccccagtaacaggcaggatacatgtcgtacat
aaaaaaactgccagaacgagaaaagaagtaattgatgctttaaatgaagcaatcgataac
agagaggaagggattatggtcaaagatcccatgtccacctacaagcctgacaaacgtggg
gaaggctggttaaaaatcaagccggaatatgtcaatgggctgatggacgagctcgacctt
ctgatagttggtggttactggggaaagggcttacgtggtggaatgatgtctcattttctg
tgtgcgattgcagagactcccgctccaaacgaaaaacctactgttttccactctatttgt
cgcattggctctggctacactatgaaggaattgcatgatctgggtttgaaactggctaaa
cactggaagccctaccataggagggaccctccctgtaacattttgtgtggcattgaaaaa
cctgaagtgtacattgaaccttgtaactccgtcatcgttcaggtcaaggcagctgagatt
gttaacagcgatatgtacaaaactgactgtaccttgagattcccccgaattgagaaaata
agagaggacaaagaatggtatgaatgcatgactttggacatgctcgcagatctcagaagt
agagcagaagggaagctggcgtccaagcaccttcatattgacgaatatgatgagccgcaa
gagaagaaaaggaaaactgtatcgaaggtgaagaaggtaatcggaatagccgagcaattt
aaagctcctgatctttctaatgtaaacaaggtttcaaatgtgtttgaagatgtagagttt
tgtgttatgacaggtacaggaaaacactccaaatctgaactggaaagccgaatagccgaa
tgtggtgggagtgtggtacagaatcctggaccagacacttactgtgtcatcgcgggagct
gagaacgtcagagtgaaaaacatcattgcttccaacaaatacgatgtggtgaaggcagag
tggcttctgcagtgttttcagtccaaaatgcttgtgccttggcagccagccgttatgatt
cacatgtctcctgacactaaagaacattttgctcgtgagtatgattgctatggagacagc
tacacagcagatacagatgttgcacaactcaaggaagtattctcaagaatgaaggataat
aaaataatgcccttggacgtgattgctgagttagaagaacgttactcatggaacagctgt
caactcagtatattcagaggaaacactatttatgtggactgttatgctgttgttaatgaa
cccagaaccaaaatccacggaacaagactatcaattagagctttggagctccgtttttat
ggggcaaaagtagtctcttgccttgaagaaggtgtctcccatgtcattataggagaagat
cattctcgggtagaagaaatgaaagcactcaggagaacatttgggaaaaaatttaagatt
gtatctgagctgtgggtaacagagtcagtgaaggagggagtcccaaagaatgaaaatcag
tacttgatttaa

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