Alpha proteobacterium HIMB5: HIMB5_00002540
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Entry
HIMB5_00002540 CDS
T02250
Name
(GenBank) glycine dehydrogenase, decarboxylating
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm00260
Glycine, serine and threonine metabolism
apm00630
Glyoxylate and dicarboxylate metabolism
apm00785
Lipoic acid metabolism
apm01100
Metabolic pathways
apm01110
Biosynthesis of secondary metabolites
apm01200
Carbon metabolism
Module
apm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HIMB5_00002540
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HIMB5_00002540
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HIMB5_00002540
Enzymes [BR:
apm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
HIMB5_00002540
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Syndetin_C
Ribosomal_L7Ae
NAT
Motif
Other DBs
NCBI-ProteinID:
AFS47023
UniProt:
J9YU86
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All DBs
Position
242165..245035
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AA seq
956 aa
AA seq
DB search
MLHNSQKDFLKRHIGPSIEEQAKMLEELNYKSLEDLIKNTVPEKIQLKDGLNIGESNSEY
EALRKLKAISKKNQIYSNFIGMGYYGTYTPYVILRNILENPGWYTSYTPYQPEVAQGRLE
MLLNFQQMIVDFTGMDIANASLLDEGTAAAEAMGLSHRLNKKDSNLVFVSENCHPQTIDV
IQTRAEPMGLKVLVGDEDKILGQLKEDLVCGILQYPGTLGDIKDPSEAISKIHKKNGKAV
LVCDLLALALLKNPRELGADIAVGSSQRFGIPMGYGGPHAAFFATKDEFKRSMPGRIIGV
SVDRHGNKAYRLSLQTREQHIRRDKATSNICTAQALLAIVSAAYAIYHGPEGIRTIAERV
SQLAKNFADKLKQSGYEIYSDHFFDTVTIVTKDKTDQIYKNALDQKVNIRRVNSEMLAVS
FDEKKNVYRANQLLKIFNAAESIKKEDPTASLPNLPKNLLRTSKYLEHPVFNSYHSETEM
LRYLKKLEDKDIALNRTMIALGSCTMKLNATAEMIPISWRELAEPHPFVPIEQMEGYRAL
FTDLKNWLRSITGFSGVSLQPNAGAQGEYAGLMVIRKYHLDRGEENRNICLIPSSAHGTN
PASAQMVGMKVVVVDCDKEGNVDFEDLKKKAELHSENLGALMVTYPSTHGVFEEKIIDIC
ELIHKHGGQVYMDGANLNALVGIARPGNFGPDVCHINLHKTFCIPHGGGGPGMGPIACKR
HLQVYLPNHPVVKDCGPATGIGAVSAAPWGSSSILSISWMYIKMMGSEGLKYATEVAILN
ANYIANRLKDHFPILYKGANGNVAHECIIDIRNIKSETGITEEDIAKRLIDYGFHAPTMS
WPVAGTMMIEPTESESLSELDRFCDTLINIKSEIDMIKSGEFDKLDNPIKNAPHTDMELA
SDEWSHKYSREQAAYPAKFLKTNKFWPPVARVDNVYGDKNIFCTCPSMDEFKEDAA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgttacataactctcaaaaagatttcttaaaaagacatattggaccttctatagaagaa
caagctaagatgcttgaagaactaaattataaatccttagaagatttaattaaaaatact
gttccagaaaaaatccaattgaaagatggtttaaatattggagagtcaaattcagagtat
gaagctttgagaaaattaaaagcaatttctaaaaaaaatcaaatttattcaaattttatt
ggtatgggttattatggaacttatactccatatgttattttaagaaatattcttgagaac
ccaggatggtacacctcttatacaccttatcagccagaagtagctcagggaagattggaa
atgttattaaactttcaacaaatgattgttgatttcaccggcatggacatagcaaatgca
tctttgcttgatgaaggaacagcagctgctgaggcaatgggattaagtcatagattaaat
aaaaaagatagtaatttagtttttgtttcagaaaattgtcatccacaaacaattgatgta
attcagacaagagcagagccaatgggattaaaagttcttgttggtgatgaagataaaatt
ttaggtcaattaaaggaagatttagtttgtggaattcttcaataccctggaactttagga
gatatcaaagatccaagtgaagctatcagcaaaattcataagaaaaatggtaaagccgta
ctagtttgtgatttattagctttagcattacttaaaaatccaagagaattaggtgcagat
attgctgttggaagttcacaaaggtttggaatcccaatgggttatggtggaccacatgca
gctttttttgcaactaaagatgaatttaaaagatctatgccaggaagaattattggtgtt
tctgtggatagacatggaaataaagcttacagattgtctttacaaactagagaacaacac
atcagaagagacaaagcgacaagtaacatttgtactgctcaggctctgttagcaattgtt
tcagcagcatacgctatttaccacggtccagaaggtattagaactattgctgaaagagtt
tctcaattagctaaaaattttgcagacaagttaaagcaatctggatatgaaatttattca
gatcatttctttgatacagttacaattgtcactaaagataaaactgatcaaatatataaa
aatgctcttgatcaaaaggtaaacataagaagggtaaattctgaaatgttagcagtttct
tttgatgaaaagaaaaatgtttatagagctaatcaattattaaaaattttcaatgcagct
gaatctatcaaaaaagaagatccaacagcaagtttacctaatttaccaaaaaatttatta
agaacttcaaaatacttagaacacccagtttttaactcgtatcactctgaaactgagatg
cttagatatttaaaaaaattagaagataaagatatagctcttaacagaactatgattgca
cttggttcttgtactatgaaattaaatgctactgcagaaatgataccaatttcatggaga
gaattagcagaaccccatccttttgtccccattgaacaaatggagggatacagagcatta
ttcactgatcttaaaaattggttaagatcaattactggtttttctggagtttcacttcaa
ccaaacgcaggagctcaaggagaatatgcgggattaatggtaattagaaaatatcattta
gatagaggagaagaaaacagaaatatatgtttaataccaagctcagcacatggaacaaat
cctgcaagcgcacaaatggtaggaatgaaagttgtagttgttgattgcgataaagaggga
aatgttgattttgaagatttaaagaaaaaagcagaacttcattcggaaaaccttggagca
ttaatggtcacatacccatctactcatggtgtatttgaagaaaaaattatagacatatgt
gagttgatacacaaacatggtggtcaagtttacatggatggtgcaaatttaaatgcactt
gttggaatagcaagaccaggaaattttggtccggatgtttgtcatataaatttacacaaa
acattctgcatcccccacggtggaggaggaccaggcatgggaccaattgcatgcaaaaga
catttacaagtttatctacctaatcatccagttgttaaagattgtggaccagcaacaggc
ataggtgctgtttctgcagccccatggggaagctcaagtattttatcaatctcttggatg
tatataaagatgatgggttctgaaggtctgaaatatgctactgaagtagctattcttaat
gcaaattatattgctaatagactaaaagatcattttccaattttatataaaggagctaat
ggcaatgtagctcatgagtgtattattgatatcagaaatattaaatcagagactggcata
acagaggaagatattgctaaaagattgatcgattatggttttcacgcgccaacaatgtct
tggccagtcgcgggaactatgatgattgaaccaacagaaagtgagagtttatctgagctt
gatagattttgtgatactttaataaatatcaaatctgaaatagatatgattaagtcaggt
gaatttgacaaactagataatcctattaagaatgctcctcatacagacatggaacttgct
tcagatgaatggagtcataaatattcaagagaacaagctgcatatcctgctaagttttta
aaaacaaataaattttggccacctgtcgcaagagtggacaatgtttatggagataaaaat
atcttttgtacttgtccaagtatggatgagtttaaagaagatgcagcataa
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