Amphimedon queenslandica (sponge): 100633937
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Entry
100633937 CDS
T02284
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
Organism
aqu
Amphimedon queenslandica (sponge)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
RRN3
Motif
Other DBs
NCBI-GeneID:
100633937
NCBI-ProteinID:
XP_019852826
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MTESEVIFREGQLLSGVLDKSQFGASQFGFVHSCYELYGGTMCNYLLSALGRIFTGFLKL
YHGFSLGVEDILVKPMADKERFKIIAEGRDCGLEAAADAFVVKNVKDKDLVIEKYTDVHH
TIGRDGLKVLDFFMKKKTDQINNKVNVACIPAGLHKPFPSNSLQLMVQAGAKGSTVNCMQ
ISCLLGQIELEGRRPPIMLSGRSLPTFLPYDTTPRSGGFVDGRFLTGVRPPEFFLHAMAG
REGLVDTAVKTSRSGYLQRCLVKHLEGITVNYDLTVRDSDGSVLQFLYGEDGLDISKTRF
LSSNQMYFLEDNYKAFLYRLDPTSAVSVLETTKAAKYQRKVDKWKKKQKQRLATPRIRRS
GFLDYCDQHLPEILAKYSDNSHSTRAQAHRSVIDLWYSSSPMLRKEFNDKHDTVYYPTTS
VLRPDRYFGSVPEKLTSDIEQYISTSPTFKNNGNQQTLLTPEKFRTLSQFKCLRAVAEPG
EPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMTGSPNIKTPAMDVPL
LPLPDAKEQGENIKKYFSRVLLKDVLDSVEVWESLDRKGEGFYHRSYVIKLTFLDPKYYK
DEYIVTPSKILEFVETCFINKLTAVISKEIKKSKDKLLKTPGTYVDKDSIPQQSSGDDDK
DIDNEGMGHDSDDDSDESDVEEAEKAIKNKKQQVSYEAADDEDIEAIEGEEEEGKEEEEN
EKDTRKDNNEESIQLDMEAESMYEPLPSQKSTSMDSSRIEAVVSKNSHLSEYIYDAENER
WCQFTLKFETGNDKIMMSYFIEKLSNKVVVWEVPDIKKGFLAESQVPGEEGLYRLKTEGV
NMQELWKHSDLLNVRKAYTNNIHIIASTFGIEAAAVAIIKEVSSVFNVYGISVNHRHLSL
IADYMTFDGDYKSFSRFGMNSNSSPFQQMSFETTMKFLRSATVRGDVDTLRSPSACLVTG
NVVHGGTGAFQCLQKLVI
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcagaagttatatttcgtgagggacagttgttaagtggtgttttggataag
tcacaatttggtgcttctcagtttggctttgtccactcttgctatgagttgtatggaggt
acaatgtgtaattatctgttgtcagctcttggcaggatcttcactggtttccttaaactc
tatcacgggtttagtctaggagtggaagacatattagtgaaaccaatggcagataaagag
agatttaaaattattgctgagggtagagattgtgggcttgaagcagctgctgatgctttt
gtagttaaaaatgttaaagataaagatttagtgatagagaagtacactgatgttcatcac
actattggtagagatggtctcaaagtgttagatttctttatgaaaaagaaaactgatcaa
atcaataataaagttaacgttgcttgtattcctgctggtttacataaaccatttcccagt
aattctctacagctaatggtacaagctggagctaaaggctctactgtcaactgcatgcag
atatcatgtcttttgggtcagatagagttagaaggtcgacgcccaccaataatgctatca
ggacggtccctacctacattccttccttacgataccactcctagatcaggtggttttgtt
gatggtcggtttctaactggcgtaagacccccagagttcttccttcatgctatggctgga
cgagagggtcttgttgatactgctgtgaagacaagccgcagtgggtatttgcagaggtgt
ctcgtaaaacatttagaaggaattactgtcaattatgatctaacagtaagggatagtgat
ggttctgttcttcagttcctttatggtgaggatggattggatattagtaagacacgattt
ctctcatcaaaccagatgtacttccttgaggacaactataaagcatttctgtataggttg
gatcccacctcagcagtgagtgtactagagacaacaaaagctgcaaaataccaaagaaag
gttgataaatggaagaagaagcagaagcaaagactagcaacaccaagaataaggagaagt
ggttttttggattattgtgaccagcatcttcctgagattttagctaaatactctgacaat
agtcatagtacaagagcacaggcgcataggtctgtaatagatttatggtattcctcatca
ccaatgctaaggaaagagtttaatgacaagcatgataccgtgtattatcccactacatca
gtacttagacctgacaggtattttggttcagttccagagaaactcacatcagacattgag
cagtacatcagtaccagtccaacatttaaaaacaatggaaaccagcaaactttattgact
cctgaaaagttcaggactctgtcacagtttaagtgtttaagagcagtagctgaaccagga
gaacctgttggactactagcagcacaatctattggtgaaccttccactcagatgacattg
aatacatttcattttgccggtagaggagaaatgaacgtcacactagggataccacgtcta
agagagatattaatgactggtagtcctaatattaaaactccagcaatggatgtaccacta
ctaccactgcctgatgcaaaggagcaaggagagaatatcaagaaatatttcagtcgagta
ttactaaaagatgttcttgattctgttgaagtgtgggaaagtctggatcggaagggggag
gggttctatcacagatcttacgtcataaaattaacattcttagatccaaagtattacaag
gatgagtacattgtgactccttcaaaaatattagaatttgttgaaacctgcttcatcaat
aaactaacagcagtcattagtaaagaaataaagaaatcaaaagataaactattaaagact
cctggtacatatgtagataaagactctatccctcaacaaagttcaggagatgatgacaaa
gacattgacaatgaaggaatgggtcatgattctgatgatgattctgatgagtctgatgta
gaagaagccgaaaaagctatcaagaataagaaacagcaagtatcatatgaagcagctgat
gacgaggacattgaagcaattgaaggagaagaagaggaaggaaaggaggaggaagaaaat
gaaaaagacacaagaaaggacaacaatgaagaaagtattcaattagatatggaggcagaa
tcaatgtatgagccactcccatcacagaagagtacatcaatggactctagtaggattgaa
gcagttgtttccaaaaattctcacttgtctgagtacatatatgatgcagaaaatgaaaga
tggtgtcagttcacactaaaatttgagactggtaatgataagattatgatgtcttatttc
atagaaaaactatcgaacaaagttgttgtttgggaggttcctgatattaagaaaggattc
cttgccgagagtcaagttcctggagaagagggactctaccgtttgaaaactgaaggtgtc
aatatgcaggaactatggaagcattctgatctgctcaatgttaggaaagcatatactaac
aatatacacattatcgcctccacttttggcattgaagctgctgctgtagccattatcaaa
gaagtatcaagtgtatttaatgtgtatggcatatcagttaatcatcgtcacctgtccctt
attgctgattacatgacatttgatggagactacaagtccttcagtaggtttggtatgaac
agtaacagctctccattccaacagatgagttttgagactacaatgaagttcttaagaagt
gcaacagttagaggagatgttgatacacttcggtcaccttcagcttgtctggtgactggt
aatgtggtccatggggggactggagcttttcaatgcttacaaaaactagttatatga
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