KEGG   Rhizobium rhizogenes K84: Arad_8902
Entry
Arad_8902         CDS       T00850                                 
Symbol
appD
Name
(GenBank) oligopeptide ABC transporter
  KO
K02031  peptide/nickel transport system ATP-binding protein
Organism
ara  Rhizobium rhizogenes K84
Pathway
ara02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ara00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Arad_8902 (appD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ara02000]
    Arad_8902 (appD)
Transporters [BR:ara02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Arad_8902 (appD)
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 SMC_N AAA_22 nSTAND1 AAA_29 ABC_ATPase AAA_16
Other DBs
NCBI-ProteinID: ACM30062
UniProt: B9JJH0
LinkDB
Position
2:1641815..1642783
AA seq 322 aa
MATPVLSVDNLSVTFRTKTGRSHPVNNVSFDLAEGEILGIVGESGSGKSVTCLALAGLLG
PTASATGFISFEDAMNDAAELGAMARSKLPSIGLIFQEPVSCLDPVRTIGSQIAEAAMSA
GMSASEAKAEALRLLAEVAIPQPETRYNAYPAQFSGGMCQRVMIATALAMQPRLIIADEP
TTALDVTVQAQVVALLVKAVRERGIPMIFISHDLDLVSEVCDRIAVMYAGSLVELNTTDN
IYDNPRHPYTRLLLEAMPGRGTPLEKLADIPGELKLHDAMPSACAFAPRCPRVEAHCATA
VPPLIAGAASLACFNPWSAHDV
NT seq 969 nt   +upstreamnt  +downstreamnt
atggccactcctgttctttcggtcgacaatctgagcgtgacgtttcggaccaagaccggc
cggtcccatccggtcaacaatgtctcctttgaccttgccgagggtgaaatcctcggcatc
gtcggggaaagcggttcgggcaagagcgtgacctgtctcgcccttgccggcctgcttgga
ccgacggcgagcgccactggattcatctcctttgaggacgccatgaatgacgcggcggaa
ctcggggcgatggcgcggtcgaaactgccgtctatcggcctgatctttcaggagccggtc
tcctgtctggatccggtgcggacgatcggctcgcagatcgctgaggcggcgatgagcgcc
ggcatgtcggcgagcgaggcgaaggccgaggcgctgcggcttctggcggaagtggccatt
ccacagccggagacgcgctacaacgcctatccggcgcagttttccggcggcatgtgccag
cgcgtgatgatcgcaaccgcgcttgccatgcagccacggctgatcattgccgatgaaccg
acgacggcgctcgacgtcaccgttcaggcgcaggtggtggccttgctggtcaaggcggtg
cgcgagcgcggcattccgatgatcttcatcagccacgatctcgatctcgtctccgaggtc
tgcgaccgtatcgcggtgatgtatgcgggatcgctggtcgagctgaataccactgacaac
atctacgacaatccgcgccatccctatacgcgactgctgctggaggcgatgcccgggcgg
ggcacgccgctggaaaagctggcggatattcccggcgagctgaaactgcatgacgccatg
ccgtcggcttgcgccttcgccccgcgctgcccgcgcgtcgaggcgcattgcgcgaccgcg
gttccgccactgatcgcgggcgcggcgtcgcttgcctgcttcaatccatggagtgcccac
gatgtctga

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