Rhizobium rhizogenes K84: Arad_8902
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Entry
Arad_8902 CDS
T00850
Symbol
appD
Name
(GenBank) oligopeptide ABC transporter
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Arad_8902 (appD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ara02000
]
Arad_8902 (appD)
Transporters [BR:
ara02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Arad_8902 (appD)
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Paralog
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GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
nSTAND1
AAA_29
ABC_ATPase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACM30062
UniProt:
B9JJH0
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All DBs
Position
2:1641815..1642783
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AA seq
322 aa
AA seq
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MATPVLSVDNLSVTFRTKTGRSHPVNNVSFDLAEGEILGIVGESGSGKSVTCLALAGLLG
PTASATGFISFEDAMNDAAELGAMARSKLPSIGLIFQEPVSCLDPVRTIGSQIAEAAMSA
GMSASEAKAEALRLLAEVAIPQPETRYNAYPAQFSGGMCQRVMIATALAMQPRLIIADEP
TTALDVTVQAQVVALLVKAVRERGIPMIFISHDLDLVSEVCDRIAVMYAGSLVELNTTDN
IYDNPRHPYTRLLLEAMPGRGTPLEKLADIPGELKLHDAMPSACAFAPRCPRVEAHCATA
VPPLIAGAASLACFNPWSAHDV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggccactcctgttctttcggtcgacaatctgagcgtgacgtttcggaccaagaccggc
cggtcccatccggtcaacaatgtctcctttgaccttgccgagggtgaaatcctcggcatc
gtcggggaaagcggttcgggcaagagcgtgacctgtctcgcccttgccggcctgcttgga
ccgacggcgagcgccactggattcatctcctttgaggacgccatgaatgacgcggcggaa
ctcggggcgatggcgcggtcgaaactgccgtctatcggcctgatctttcaggagccggtc
tcctgtctggatccggtgcggacgatcggctcgcagatcgctgaggcggcgatgagcgcc
ggcatgtcggcgagcgaggcgaaggccgaggcgctgcggcttctggcggaagtggccatt
ccacagccggagacgcgctacaacgcctatccggcgcagttttccggcggcatgtgccag
cgcgtgatgatcgcaaccgcgcttgccatgcagccacggctgatcattgccgatgaaccg
acgacggcgctcgacgtcaccgttcaggcgcaggtggtggccttgctggtcaaggcggtg
cgcgagcgcggcattccgatgatcttcatcagccacgatctcgatctcgtctccgaggtc
tgcgaccgtatcgcggtgatgtatgcgggatcgctggtcgagctgaataccactgacaac
atctacgacaatccgcgccatccctatacgcgactgctgctggaggcgatgcccgggcgg
ggcacgccgctggaaaagctggcggatattcccggcgagctgaaactgcatgacgccatg
ccgtcggcttgcgccttcgccccgcgctgcccgcgcgtcgaggcgcattgcgcgaccgcg
gttccgccactgatcgcgggcgcggcgtcgcttgcctgcttcaatccatggagtgcccac
gatgtctga
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