Actinomyces radicidentis: AXF14_12790
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Entry
AXF14_12790 CDS
T04288
Name
(GenBank) ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ard
Actinomyces radicidentis
Pathway
ard03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ard00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXF14_12790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ard03019
]
AXF14_12790
Messenger RNA biogenesis [BR:
ard03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AXF14_12790
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AMD88630
UniProt:
A0A0X8JGZ3
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Position
complement(3023956..3025590)
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AA seq
544 aa
AA seq
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MRITPLGGLGEVGRNMTVFEVDGKLLVVDCGVLFPEEDQPGVDLILPDFSSIEDRIDDVV
GLVLTHGHEDHIGGVPYLLRLRDDIPIVGSQLTLAFVEAKLKEHRIRPSLRVVREHERVS
YGPFDLEFVAVNHSIPDAMACFIRTAAGKALITGDFKIDSLPIDGRITDLRSFARFADEG
VDLFLVDSTNAEVPGMIGHEAQIGPVLDNVFAESDQQIIVASFSSHVHRVQQVLDAAALH
GRKVALVGRSMVRNMGIAAERGYLKVPDGVLIDARDVNSVPDDERVLMVTGSQGEPMAAL
SRMAHGEHRSVTVEPGDTVIFASSLIPGNENSVYRVINQLMRLGARVVHQGNAKVHVSGH
ASSEELLHVYNIVAPENVMPIHGEIRHLVANGALAVKTGVNPKNVVLAEDGVVVDLVDGR
ARIAGAVPCGYVYVDGSSVGEIDETELKDRRILSEEGFISVYAVVETKTGTILAGPDIQA
RGVAEDDEVLGEILPDVTKALQEALDKGNQDAHSLQQVMRRTVGRFVGRRLKRRPMIVPV
VIEA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccccgctgggtggcctcggcgaggtcgggcgcaacatgaccgtcttcgag
gtcgacggcaagctcctcgtcgtcgactgcggcgtcctcttccccgaggaggaccagccc
ggcgtcgacctcatcctcccggacttctcctccatcgaggaccgcatcgacgacgtcgtc
ggcctcgtcctcacccacgggcacgaggaccacatcggcggcgtcccctacctcctgcga
ctgcgcgacgacatcccgatcgtcggctcccagctcactctcgccttcgtcgaggccaag
ctcaaggagcaccgcatccgccccagcctgcgcgtcgtccgcgagcacgagcgcgtctcc
tacggccccttcgacctcgagttcgtcgccgtcaaccactccatcccggacgcgatggcc
tgcttcatccgcaccgcggccggcaaggcgctcatcacgggcgacttcaagatcgactcc
ctgccgatcgacggccgcatcaccgacctgcgctccttcgcgcgcttcgccgacgagggc
gtcgacctcttcctcgtcgactccaccaacgccgaggtccccggcatgatcggccacgag
gcccagatcggccccgtcctcgacaacgtcttcgccgagtccgaccagcagatcatcgtc
gcgtcgttctcgagccacgtgcaccgcgtccagcaggtcctcgacgccgccgccctccac
ggccgcaaggtcgccctcgtcggccgctccatggtccgcaacatgggcatcgccgccgag
cgcggctacctcaaggtccccgacggcgtcctcatcgacgcccgcgacgtcaactccgtc
cccgacgacgagcgcgtcctcatggtgaccggctcccagggcgagccgatggccgccctg
tcccgcatggcccacggcgagcaccgctccgtcacggtcgagccgggggacaccgtcatc
ttcgcctcctccctcatcccgggcaacgagaacagcgtctaccgcgtcatcaaccagctc
atgcgcctcggcgcccgcgtcgtccaccagggcaacgccaaggtccacgtctccgggcac
gcctcctccgaggagctcctccacgtctacaacatcgtggcccctgagaacgtcatgccg
atccacggcgagatccgccacctcgtcgccaacggggcgctggccgtcaagaccggcgtc
aacccgaagaacgtcgttctcgccgaggacggcgtcgtcgtcgacctcgtcgacggccgc
gcccgcatcgccggcgccgtgccctgcggctacgtctacgtcgacggctcctccgtcggc
gagatcgacgagaccgagctcaaggaccgccgcatcctctccgaggagggcttcatctcc
gtctacgccgtcgtcgagaccaagaccggcacgatcctcgccggcccggacatccaggcc
cgcggcgtcgccgaggacgacgaggtgctcggcgagatcctccccgacgtcaccaaggcc
ctccaggaggccctcgacaagggcaaccaggacgcccactccctccagcaggtcatgcgc
cgcaccgtcggacgcttcgtcggccgccgcctcaagcgccgcccgatgatcgtcccggtg
gtcatcgaggcctga
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