Psychromicrobium lacuslunae: UM93_02925
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Entry
UM93_02925 CDS
T03775
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ari
Psychromicrobium lacuslunae
Pathway
ari03030
DNA replication
ari03430
Mismatch repair
ari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UM93_02925
03430 Mismatch repair
UM93_02925
03440 Homologous recombination
UM93_02925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ari03032
]
UM93_02925
03400 DNA repair and recombination proteins [BR:
ari03400
]
UM93_02925
Enzymes [BR:
ari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UM93_02925
DNA replication proteins [BR:
ari03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UM93_02925
DNA repair and recombination proteins [BR:
ari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UM93_02925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AJT40728
UniProt:
A0A0D4BWM7
LinkDB
All DBs
Position
636328..639855
Genome browser
AA seq
1175 aa
AA seq
DB search
MARSDSFVHLHNHTEYSMLDGAARLGDLFSHAAELGMDAVATTDHGFVFGAFDFWSKAKA
AGIKPIIGVEAYLTPGTARQDRTRVKWGDGSGKDVAGAGAYTHMTMWSETTEGMHNLFRM
SSLASLEGYLYKPRMDRDLLQTYGKGLIATTGCPSGEVQTKLGLGLYKEAVQAASDFQDI
FGKGNFYCELMDHGLSIERNVKADLLKLAKELKLPLVATNDLHYTHAEDASSHAALLCVQ
SGSTLADPKRFKFDADEFYLKSPQEMRALFSDFPEACDNTLLIAERCEVEFDTKANYMPR
FPAPEGEDEQSWFVKEVEKGLHYRYPKGIPTEVRERANFEVGVITQMGFPGYFLVVADFI
NWAKDNGVRVGPGRGSGAGSMVAYAMRITDLDPIQHGLLFERFLNPERVSMPDFDVDFDD
RRRGEVIKYVTEKYGDERVAMIVTYGTIKAKQALKDSSRVLGYPFSTGERLTKAMPPDVM
GKGILLTDVHNKEAKRYGEAEEMRELLRTDADSQKVFETALGLEGLKRQWGVHAAGVIMS
SDPLINIIPIMRREQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDAIENIKMNRDF
DLDLEHLPVDDKASYELLSRGETLGVFQFDSSGYQQLCRMLQPDQFSDITALGALFRPGP
MGTNTHVNYALRKNGGQQVEHIHPELAGVLEELLGETYGLLVYQEQVMAIAQRLAGYSLG
QADILRRAMGKKKKEELDKQQLSFFAGMAERGYSEKAAQALWDTLVPFSNYGFNKSHAAA
YGLVSYWTAYLKAHYPAEYMAALLTSVGDNKDRSAIYLNECRRMGITVLPPDVNESALNF
TPVGGDIRFGMGAVRNVGANVVSAMIEARQEKGNFESFSDFLMKVPAVVCNKRTIESLIK
AGAFDSLGHPRRALAMVHEEAIDSVVVLKRNEAANQFDLFSAFEDSSENSSLAVDVPDLP
EWEKKDKLAFERDMLGLYVSDHPLRGLEGVLSQHAEHTVTHLMGEDGPGDGAIVTIAGMI
TSLSRRIAKASGNAYARAEVEDLGGSMEVMFFGQVYGPIASVLAEDLIVTVKGRVQKRDD
GSTTLNAMELTVPDVSDDGSGPVVISLLEYKATESVITALADVLGTHPGNSEVRLHLTGS
SAVKVMKLPLHRRVNPNPALFGDLKVLLGPTCLEA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gtggctcgctctgactctttcgttcaccttcacaatcacaccgagtattcaatgctggac
ggagccgcgcggctcggcgatttgttctcgcacgcggccgaacttggcatggacgcggtg
gcgactaccgaccatggcttcgtcttcggggctttcgatttctggtccaaggcgaaggca
gcgggaattaagccaatcattggcgtcgaagcgtatctgaccccaggcaccgcccgccag
gaccgcactcgtgtcaaatggggtgatggctccggcaaggacgtggcgggtgcgggtgcc
tacacgcatatgacaatgtggtcagagaccaccgagggtatgcataatttgttccggatg
tcctcgctagcttcgctggagggctatctttacaagcctcgaatggaccgcgatctgctg
caaacctacggcaagggcctgatcgccactaccggttgcccctcgggtgaagttcagacc
aagctaggtcttggcctctacaaagaggcagtgcaagcggccagtgatttccaggacatt
ttcggtaaaggcaatttttattgcgagctgatggaccacggcctcagcattgaacgcaat
gtcaaggccgacctgctcaagttagccaaggaactgaagctgccgctggtggccaccaat
gacttgcattacacacacgccgaggacgcctctagccatgctgcgttgttgtgcgtgcaa
tcgggatccaccctggccgacccaaagcggttcaaattcgacgctgacgagttctacctc
aaatctccgcaggagatgcgggcgttgtttagcgacttcccggaagcttgcgacaatacg
ctattgatcgccgagcgttgcgaggtcgagttcgataccaaagcgaactatatgcctcgt
ttccccgccccggagggcgaagacgagcagtcctggttcgtcaaggaggttgagaaggga
ctgcattaccgctatcccaagggaattcccaccgaggtacgtgagcgcgcgaacttcgaa
gtcggggtgatcactcagatggggttccccggttacttcctggtggttgccgacttcatt
aactgggccaaggacaatggtgtccgggtggggcctggtcgtggctctggcgctggttca
atggtggcctatgcgatgcgaatcaccgacctggacccgatccagcacggtctgctcttc
gagcgattcctcaacccggagcgcgtctcgatgcctgacttcgacgttgacttcgatgat
cggcgtcgcggcgaggtgatcaagtacgtcaccgaaaagtatggtgatgaacgcgtcgcg
atgatcgtcacgtacggcaccattaaggccaagcaagcgctcaaggactcctctcgggtg
ctcggctatcccttctcgacgggggagcggttgaccaaggcgatgccgccggatgtgatg
ggcaaaggcatcctgctcaccgatgtgcacaataaggaggccaagaggtacggcgaggca
gaggaaatgcgcgaactgctgcgcaccgacgctgattcgcagaaagtttttgagaccgcg
ctgggcttagagggcctgaagcggcagtggggggtgcatgccgccggggtgatcatgtcc
tccgatccgctgattaatatcatcccgatcatgcgtcgcgagcaggacggtcaggtgatc
actcagttcgattacccgacgtgtgaaggtctcggcctgatcaagatggacttcttgggg
ctgcgaaatctgaccatcatctcggacgccatcgagaacattaagatgaaccgggacttt
gacctggatcttgagcatttgccggtggacgataaagcgtcctacgaattgctctcccgg
ggtgaaactctcggtgttttccagtttgactcctccggatatcaacagctttgccggatg
ctgcaacccgatcagttctccgacatcaccgcgctcggcgcactgttccgacccggtccg
atgggtaccaatacgcacgtcaactatgcattgcggaaaaacggcggtcagcaagtcgag
cacattcacccggagctcgccggagtgctcgaagagctactcggtgaaacctatggcctg
ctggtttaccaagagcaggtgatggcaatcgcgcagcgattggccggttactcgcttggc
caagcagatattttgcgccgtgcgatgggtaagaagaaaaaagaagagctggacaaacag
caacttagcttcttcgccgggatggccgagcgcggctattccgagaaggccgcacaagca
ctctgggacaccctagtgcccttctcgaactacggcttcaataaatctcacgctgctgcc
tatggcctggtctcctactggaccgcctacctcaaagcacattatccggctgagtacatg
gccgcgctgctgacctctgttggtgataataaggatcgctcggcgatctatctgaatgag
tgccgtcgaatgggcatcaccgtattaccgccggatgtcaatgaatcggcgctcaacttc
accccggtcggcggcgatatccgctttggcatgggagcggtgcgcaatgtgggggcgaac
gtcgtttcggcaatgattgaagcgcgccaggagaagggcaattttgagtcctttagcgac
ttcctgatgaaagtgccggcggtggtctgtaataagcgcaccattgaatcgctcatcaaa
gccggcgcttttgactcgctgggccacccgcgtcgggcgctcgccatggttcacgaagag
gccatcgactcggtcgtagtgctgaaacgcaatgaagcggcgaatcagttcgatctgttc
agcgctttcgaggattcctccgagaacagcagcctggcggttgacgtcccggacctgccg
gaatgggaaaagaaggacaaactggcgtttgagcgcgatatgctcgggctttacgtctcc
gatcaccccttgcgcggcttggagggcgtactgagtcagcacgccgaacacaccgtgact
cacctaatgggagaggacggaccgggcgacggagcgatagttacgatcgccgggatgatt
acctcgctttcccgccggattgccaaggccagcggcaatgcctatgcgcgcgccgaggtg
gaagatctcggcggctcaatggaagtgatgttcttcggacaggtttatgggccgatcgcc
agtgtgctggctgaagacctgattgtcactgtgaagggccgagtgcaaaagcgtgatgac
ggctcaacgaccttgaacgcgatggaacttacggtgcccgatgtcagcgacgatggctcc
ggtccagtggttatttcgctgctcgaatacaaggccaccgaatccgtgatcaccgccttg
gcagacgttttgggtactcatccggggaactccgaagtgcgcttgcatttgaccggctct
tcggcggtcaaggtgatgaaactgccattgcatcgcagggtgaaccccaaccccgcactg
tttggagatctcaaggttttgctgggacccacctgcctggaggcatga
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