Psychromicrobium lacuslunae: UM93_13500
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Entry
UM93_13500 CDS
T03775
Name
(GenBank) recombinase RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ari
Psychromicrobium lacuslunae
Pathway
ari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UM93_13500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ari03400
]
UM93_13500
DNA repair and recombination proteins [BR:
ari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UM93_13500
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
ABC_tran
RsgA_GTPase
AAA_29
SbcC_Walker_B
DUF2813
Motif
Other DBs
NCBI-ProteinID:
AJT42253
UniProt:
A0A0D4C0Y1
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Position
complement(2877243..2878445)
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AA seq
400 aa
AA seq
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MYLEKLSLTDFRSYPQVDLELAPGVTVFVGSNGLGKTNLIEALGYLSSLASHRVSQDGPL
IRFGAERAIIRGALVRAQQRLSLEVEINAGRANRARINRANPVRARDILGLCRTVLFAPE
DLALVKGDPGNRRRFLDDLLQLLHPRFAGLRADYDRVLKQRNALLKSARSHGGFRKQATP
EFVSTIEVWDQHLAAAAAQLLAARLELLAGLRGPLAEAYAQLTDGSKGLTAKYRSNLTGY
EEDNDSTPTEATEAEGLAELSELELTDRYLNALSAARSREMDRGITLIGPHRDELELQLG
DAPARGYASHGETWSVALALRLASYRVLRDDAEQGVLGSDPILILDDVFAELDVARRTKL
AKMVASAEQVLVTAAVEDDIPAELSGQRIRVISAGVIDGQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
gtgtatctagaaaagctttcgctgaccgattttcggagctatccgcaggtcgatcttgag
cttgcacctggcgtcacagtttttgtcggctccaatggcctggggaagaccaacctgatt
gaagccctgggttacctcagttcgctggcatcccatcgggtttctcaggatgggccgctg
atccgtttcggtgcggagcgcgcgattattcgcggtgccttagtacgtgctcagcagcga
ttgagcctcgaggtcgaaatcaatgcggggcgagcaaatcgggcccgaattaaccgggcc
aacccggtgcgggctcgagacattctggggctctgtcggactgtgctttttgcgcccgag
gatttggctttggtgaagggagatccggggaatcggcggcggtttcttgacgatctcctg
caattactgcatcctcgctttgctggcctgcgcgccgactacgatcgggtactcaagcag
cgcaatgcactactcaaatcggcccgtagtcatggcggatttcgcaagcaagctaccccc
gagttcgtctccaccatcgaagtctgggatcaacatctggctgctgcggcagcgcagctg
ttggcagctcgactagagctgctggctgggttacgaggaccccttgccgaggcttatgct
cagttgaccgatggctcaaagggactgaccgctaaatatcgctccaatttgaccggctat
gaggaggataacgactcgactccgactgaagctaccgaagcggagggtctagctgagctg
agcgagctggaactgactgatcgttatctgaacgctttgagcgcggcgcgttcgcgggag
atggaccgcggtattaccctgatcggaccgcatcgtgatgagttagagctgcaactaggt
gatgccccggcgcgtggctatgcttcccacggtgagacctggtcagttgctctagcactg
cgactcgcctcgtatcgggtgctgcgcgacgatgctgaacaaggtgttctgggatccgat
ccgatcctgattctggacgatgtattcgccgagctcgatgttgctcgacgcacgaaattg
gcgaaaatggttgcttccgccgagcaagtactggttaccgctgcggttgaggacgatatc
cccgccgaactgagcggccagcgtattcgtgtcatttccgctggtgttatcgatggtcag
tga
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