KEGG   Arthrobacter sp. ZXY-2: ARZXY2_3628Help
Entry
ARZXY2_3628       CDS       T05201                                 

Gene name
lig
Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
arx  Arthrobacter sp. ZXY-2
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:arx00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    ARZXY2_3628 (lig)
Enzymes [BR:arx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ARZXY2_3628 (lig)
DNA repair and recombination proteins [BR:arx03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ARZXY2_3628 (lig)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3775314..3777833
Genome map
AA seq 839 aa AA seqDB search
MAGKQKERVVVEGHELTLTNLGKIIYPETGTTKAEVLAYYAAVAPYLIPAAANRPVTRKR
WVNGVGTAENPGEVFFQKNLEDSAPRWIPRVTIHHSDHANVYPMVNNLATLTWMAQIASL
EIHVPQWQVDPAGNPLRPDRFVLDLDPGPGAGLPECVEVARLARSILQDMGMEPVPVTSG
SKGIHLYTGLEGTLKSDQVSAFAHELARALEADHPALVVSDMKKSLRKGKVLVDWSQNSG
NKTTIVPYSLRGKAHPTVAAPRTWAELEDPDLDHLDYTEVMERVSTGEDFFAPISGRHLP
PHGENDDVGRPGSASSDANPGGREKLTVDGRLSKYVGMRDPGKTPEPFPSSSGPSVGDAS
RRSSEQPKPGDPAPPGGIFVIQEHHARRYHLDLRLERDGVLASWALPRGVPETPDRNNLA
VHTEDHPMEYADFAGVIPKGEYGAGTMTIWDRGEYTCEKWREGKEVIATLTGEPGGGLGG
TKRLALINTGDRWLIHLMKEQPGGRRASKAAPEPPKPGPMQDYAPMLATSGTTDDLHGGD
WLYELKWDGIRAIITGTEGKIRLMSRNGNDLTATYPELTDRSCWPDGDFVADGEIVALGK
GSRPDFGLLQQRMNLVKAGDIERARASVPVQLMLFDLLYDDGADLTGLPFRGRRERLAAF
AERLTGGCPLHLSEVLDHDVDDLLHVASDLKLEGVMAKKAGSRYSPGRRSRAWIKLKLEQ
SQEVVVGGWRPGAGARSGTFGSLLLGVPRDGKLHYVGRVGTGFKDWQLKEIMGKLESRAA
EESPFLDIPREDAAGARWVDPELVAEVTFGEWTGPGRLRHPVWRGWRPDKSPEDVNQPN
NT seq 2520 nt NT seq  +upstreamnt  +downstreamnt
gtggcaggaaagcagaaggagcgtgtcgtcgttgagggtcatgagctgaccctcacgaac
ctgggcaaaatcatctacccggagaccggcaccaccaaggccgaggtgctggcctactac
gccgcggttgccccgtacctgatccccgcggcggccaaccgtcccgtgacgcgcaagcgc
tgggtgaacggcgttggaacggcagaaaacccgggcgaggtcttcttccaaaagaacttg
gaagactcggcgcccaggtggattccgcgggtcaccattcaccattcggaccacgccaat
gtctaccccatggtcaacaacctcgccacgctgacgtggatggcgcagatcgcgtcattg
gaaatccacgtaccgcagtggcaggtggaccctgcaggtaatccgttgcgccctgaccgc
tttgtcctcgacctcgaccccggaccgggcgccggcctgcccgaatgcgttgaagttgcc
cggctggcccgttccattctccaggacatgggcatggagccggtgccggtcaccagcggc
agcaaaggcatccacctctacacgggcctggaagggacgctgaagtccgatcaggtctcc
gccttcgctcacgaacttgcccgggccttggaagcggaccacccggcgttggttgtgagt
gacatgaagaagtccctccgcaagggaaaggtcctggttgactggagccagaacagcggc
aacaagaccacgattgtcccgtactccctgcgcggcaaggcgcaccccaccgtcgccgcc
ccgaggacctgggcggagctcgaagacccggacctggaccacctcgactacaccgaagtg
atggaacgggtcagcactggcgaggacttcttcgcgccgatttccggccggcacctcccg
ccgcacggtgaaaacgacgacgtcggaaggccgggttccgcgtcatcggatgcgaacccg
ggtggtcgggagaagctgacggtggacggccgcctgtccaagtacgtaggaatgcgtgat
ccgggcaagaccccggaacctttcccgtcgtcgtccggtccttccgtaggcgacgcgtcc
cggaggtcgtccgaacagcccaagcccggagaccctgccccgcccggcggtatcttcgtc
atccaggaacaccatgcccggcgataccacttggacctgcgcctggagcgggacggagta
ctggcctcatgggcgctgccgcgcggcgtcccggaaacgccggaccggaacaaccttgcc
gtgcataccgaagaccaccccatggagtacgccgattttgcgggtgtcatccccaaaggc
gagtacggtgcagggaccatgaccatctgggaccgcggcgaatacacgtgcgaaaaatgg
cgcgaaggcaaggaagtgatcgccaccctcacgggggaaccaggcggtggcttgggcgga
acaaagcggctcgccctcatcaacaccggcgaccgttggctcatccacctcatgaaggaa
cagcccggaggccgcagggcgtcgaaagcggcaccagaaccacccaaacccggaccgatg
caggactatgcgccgatgctggcgacgtcgggcaccaccgatgatctgcacggaggtgac
tggctctacgaactcaaatgggatggcatccgcgccatcatcaccggaaccgaaggcaaa
atccggctgatgagccgcaacggcaacgacctcacggccacctaccctgagctgacggac
cggtcctgctggcccgacggcgacttcgtggcggacggcgaaatagttgccctcgggaag
ggttcgcggcccgacttcggcttgctccagcagcgcatgaacctcgtcaaagccggggac
attgagcgggcccgggcttcggttcccgtgcaactgatgcttttcgaccttttgtacgac
gacggcgcggacctcaccgggctgcccttccgcggccggagggagcggctcgcagccttt
gccgaacgcctgactggcggttgcccgcttcatttgtccgaggtactggaccatgatgtg
gacgacctcctgcatgtggcgtccgatctcaaactggaaggcgtgatggccaagaaggcc
gggagccgctactcccccgggcggcgcagccgggcgtggatcaagctaaagctcgaacag
agccaggaggtagtggttggcggctggcgtccgggcgccggagcccggagcggaacgttc
ggctcgctcctcctgggggtcccccgtgacgggaagctgcattacgtgggacgcgtgggc
accggcttcaaggactggcagctgaaggagatcatgggcaagctcgagtcccgtgctgcg
gaggaatcgcccttcctggatattccgcgcgaggatgccgcgggcgcacggtgggtggat
ccggagcttgtggctgaggtgactttcggggagtggaccggcccgggccgtttgcggcac
ccggtgtggcggggttggcggccggacaagtctcctgaggacgtgaaccagcccaactga

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