Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0242
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Entry
RATSFB_0242 CDS
T01624
Symbol
rluC
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asb03009
]
RATSFB_0242 (rluC)
Enzymes [BR:
asb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
RATSFB_0242 (rluC)
Ribosome biogenesis [BR:
asb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RATSFB_0242 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BAK80804
UniProt:
G2IG76
LinkDB
All DBs
Position
305575..306558
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AA seq
327 aa
AA seq
DB search
MKQEIRISFNEKDQRLDRFLRKLFKNVELNLIFKDIRNGNIRVNGKKQKINYRIQEDDVL
SIFGYYYDLNNNKSIDAEEYIGYNKPKICYEDSNILVAIKDVDTLVHSDGKNEKDLTRDV
NIYLSNKGNTNLDDNLTFNISPVNRLDRNTYGLVIFGKNRVAARELCELIKFRKISKYYK
VLVEGKIKDGIYTAYIKKDSKLNKSIVYGYKVQDSKEIKMELKMIDTNGVISLLDIKLIT
GRSHQIRSHLKFLNNPVIGDLKYGNKELKNYFFNKYGVQNQLLFAYKLHFNGINENMMLN
YLNNKLILCSLTSQFKRIVRQEFKIIF
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagagattagaattagttttaatgaaaaggaccaaagattagataggttttta
aggaaattatttaaaaatgttgagttaaatctgatatttaaagatataagaaatggtaat
atacgtgttaatggtaaaaaacaaaaaataaattatagaatacaagaagatgatgttttg
agtatatttggttattattatgatttgaataataataaaagtatagatgcagaggagtat
attggatataataaacccaaaatatgttatgaagattcaaatattttagttgcaataaaa
gatgttgatacattagttcattcagatgggaaaaatgaaaaagatttaactagagatgtt
aatatatatttatcaaataaaggaaatacaaatttagatgataatttaacttttaatata
tccccagtaaatagattagatagaaatacttatggactggttatatttggaaaaaataga
gtagctgcaagggaactttgtgaacttattaaatttagaaaaatttctaagtattataaa
gtacttgttgaaggtaagataaaagatggtatatatactgcatatataaaaaaagatagt
aaattaaataaatcaatagtatacggttacaaagtccaggattccaaagaaataaaaatg
gaacttaagatgattgatacaaatggtgtaattagtttgttagatataaaattaataact
ggaaggagtcatcaaataagaagtcaccttaagtttttaaataatccagtaattggagat
ttaaaatatggaaataaggagttaaaaaattatttttttaataaatatggtgtacaaaac
cagttattatttgcatataaattgcattttaatggaataaatgaaaatatgatgttaaat
tatttaaataataaattaatattatgttcattaacatcacagtttaaaaggattgtaaga
caagaatttaaaataattttttag
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