Hoyosella subflava: AS9A_1764
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Entry
AS9A_1764 CDS
T01514
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
asd
Hoyosella subflava
Brite
KEGG Orthology (KO) [BR:
asd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AS9A_1764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asd03021
]
AS9A_1764
Transcription machinery [BR:
asd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AS9A_1764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AEF40213
UniProt:
F6ELG3
LinkDB
All DBs
Position
complement(1834285..1835796)
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AA seq
503 aa
AA seq
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MASTETPGTAGSDSDSGTGAVTAPQRTAARKAPAKKSPAKAAKQATAAKTAPEQAAQEEA
LTAGTAPAAENGAAAPAKTARRAAKKTTRSEGATKKAPRKTAQKAAPSATEPASVDADAE
AEENGLPDIEPGEDLADAEIELSDAELDASDAATAAQGRRRRSQAPDKDEKDPSGDFVWD
EEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLFAAEKMRR
FAEAGEKVAPPLRQNLSWVVRDGNRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGN
LGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRE
LLQDLGREPTPEELAKEMDISPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAV
VAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQ
IESKTMSKLRHPSRSQVLRDYLD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtggcatctaccgagaccccgggcactgccggctcagattccgactctgggactggtgca
gttaccgctccccagcgcactgcagcccgcaaggcccccgctaagaagtcgccagcgaag
gccgccaagcaggcgactgccgcgaagactgctcccgagcaagcagcccaggaggaggcg
ctgaccgctggcacggcacctgctgccgagaacggcgcagcggctcccgctaagacagcg
cgccgggcagccaagaagacgacacgttccgagggcgccacgaagaaggcgccgcgcaag
actgcgcaaaaagctgcaccgtcggcaaccgaacccgcatccgtcgatgctgatgccgag
gcagaagaaaacggtcttcccgatatcgaaccgggcgaggacttagccgacgcggagatc
gaactcagcgatgcggaactcgacgcgtcggacgccgcgactgccgcgcagggccgccgc
cgccgcagccaagcgccggataaggacgagaaagatccgtccggggacttcgtctgggac
gaggaggagtcggaagccctgcgccaggcgcgcaaggacgccgagctcaccgcctccgcg
gactccgttcgtgcttacctgaagcagatcggcaaggttgcacttctcaacgccgaagag
gaagtcgaactcgccaagcggatcgaagctggcctcttcgcggcagagaaaatgcgccga
ttcgccgaggccggtgagaaggtagcgccgccgctgcgtcagaacctcagctgggtggtg
cgggatggaaaccgtgcgaagaaccatctcctcgaagcaaacctccggctcgtcgtgtcg
ctggcaaagcgatacaccggccgcggaatggccttcctcgatctgattcaggaaggcaac
ctgggcttgatccgtgcagtcgagaaattcgactacacgaaggggtacaaattctcgacg
tacgccacgtggtggatccggcaggccatcacccgggccatggccgatcaggctcgcacc
atccgtataccggtgcacatggtcgaggtcatcaacaaactgggccgcattcagcgtgaa
cttctgcaggatctgggtcgcgagcccactcctgaggaactcgccaaagagatggacatc
tccccggagaaggtcctcgagattcagcagtatgctcgcgagcccatttcgctcgatcag
acgattggcgacgaaggggacagccagctcggcgacttcatcgaagatagtgaagccgtc
gtcgctgtcgacgccgtgagcttcacattgttgcaggatcagttgcagtcggtgcttgaa
accctttctgagcgcgaagccggtgtggtgcggttgcgattcggcttgacagacggccag
ccccgcacactggacgaaattgggcaggtgtacggggtgacccgtgagcgcatccggcag
atcgagtcaaagaccatgtcgaagctgcgtcaccctagccgcagccaggtgttgcgggac
tacctcgactga
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