Hoyosella subflava: AS9A_2018
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Entry
AS9A_2018 CDS
T01514
Name
(GenBank) Putative helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:3.6.4.-]
Organism
asd
Hoyosella subflava
Brite
KEGG Orthology (KO) [BR:
asd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asd03019
]
AS9A_2018
Messenger RNA biogenesis [BR:
asd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AS9A_2018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
AAA_22
CHD5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEF40467
UniProt:
F6EP01
LinkDB
All DBs
Position
2088045..2090780
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AA seq
911 aa
AA seq
DB search
MSEAQSPQTERAAFAAMLPFPMDPFQVRACDALEGGHGVLVCAPTGAGKTVVGEFAVHLA
LSSGRKCFYTTPIKALSNQKYNDLVARYDRDTVGLLTGDQSINSEAPVVVMTTEVLRNML
YAGSDTLRGLSHVVMDEVHFLADRFRGAVWEEVILHLADDVALVSLSATVSNAEEFGAWM
ETVRGDTTVIVDETRPVPLWQHMLVGPRLLDLFPSRSTGKGSRALNPDLLAHVRKRLAAA
GAERGHYRQSNRDRGRFRGGNGARYRPPGRAEIIARLDGEGLLPAITFVFSRAGCDAAVG
QCVRAGLALTTEAEAKEIRAIITKHTGELPPADLQVLGFSGWCTALERGIAAHHAGMLPA
FRHTVEELFVKGLVRAVFATETLALGINMPARTVVLESLVKFNGDTHADLTPGEYTQLTG
RAGRRGIDIEGHAVVLWQPGVDPEMVAGLASTRTFPLRSSFAPGYNMAINLLRQRPAEDA
RALLERSFAQFQTDRSVVGAARTVERNERELERLEGRVDCHLGDFAEYARLRRGISQREK
DLERSATAERRDAAASSLVKLRRGDVIVIPSGRRAGVAAVVEPDREFDDPRPLVITDSAW
AGRVTLRDFPIPVQTLGAVRLPRHIDFRSAQVRRDLASTLRNLGYTPPHRAPGRKGQKAA
AANDKELARMRRTLKAHPCHTCEEREEHARWFERYDRLKADTDRLRRQMNLASSSLARTF
DRIVTLLTERGYVSEASDTADSTVTEEGEWLSRIYSESDLLVAEALRRGIWKGLGPAELA
ATVSAVVFETRREGVTAGHVPTAPLRRSLADTMRIWEEIHSDELRHKLPTMREPDAGFVH
AAYLWATEAPLVEALLAANEISAGDFVRWCRQLIDLLDQIRIAAPDREVRSTAGKAIAAV
RRGVVAVDADE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaagcgcagagcccgcaaacggaacgcgctgcgttcgccgctatgctcccattc
cccatggaccccttccaggttcgtgcgtgtgatgcgctcgaggggggccacggcgtgctg
gtatgcgctccgactggggcaggcaagacggtagtgggagaattcgcggttcacctggcg
ctgagttcgggccggaaatgcttctacacgacgccgattaaggcgctgtcgaaccagaag
tacaacgatctcgttgcccggtacgaccgggacacagtcgggctcctcaccggggatcaa
agcatcaactcggaagccccggttgtggtcatgacgaccgaagtcctccggaacatgctg
tacgccgggtccgatacgctgcgcggattgtcacacgtggtgatggacgaagtgcacttc
ctcgccgaccgtttccgtggggcagtgtgggaggaagtgatccttcacctcgcggatgat
gtggcgctcgtcagcttgtccgcgactgtcagcaatgccgaggaattcggcgcctggatg
gaaaccgttcggggcgacactacggtcatcgtcgatgaaacgcgccctgtgccactgtgg
cagcacatgttagtaggtccacgcctgctcgatctctttccgagccgttcaacggggaaa
ggttcgcgcgcgctgaaccccgatctccttgcccatgtgcgcaaacgcctcgctgccgcc
ggggcagagcgtggccactatcgacagtcgaaccgcgacaggggacgcttcaggggcggc
aacggtgcccggtaccggcctcctggccgcgcggagatcattgcgcggctcgacggcgag
ggcttgctccccgcgatcacgttcgtcttcagccgcgcaggctgtgatgcggcggtcggc
caatgtgtccgggctgggctggctctgacgacagaagcggaagcgaaagagatccgggcg
atcatcaccaagcacaccggggaactgcctccggcagacttgcaggtgctgggcttctcg
gggtggtgcactgcgcttgagcggggtatcgcggcgcatcatgctggcatgctgcctgcg
ttccggcacactgtggaagaactattcgtcaaggggcttgttcgcgctgtgttcgcgacg
gagacgcttgcgcttggcatcaatatgcccgcgcgcaccgtggttctcgaaagcctggtc
aagttcaacggtgacacgcacgcagacctcactccgggtgagtacacgcagctgaccggg
cgcgcggggcggcggggaatcgacatcgagggccacgctgttgtgttgtggcagccgggg
gtcgacccggaaatggtcgccggtctcgcctcgacacgaacatttccgctgcgcagttca
ttcgcgcccggttacaacatggcgatcaacctgctccggcagcgcccagctgaagatgcc
cgcgcgctactggagcggtcgttcgcgcagtttcagaccgacagatccgtcgtgggcgcc
gcgcggaccgtcgaacgaaacgagcgcgaactcgaacggcttgaaggtcgcgtcgactgc
cacctcggcgacttcgctgagtacgcgcgactgcgtcgcggcatttctcagcgcgagaag
gatctcgagcgcagcgccaccgcggagcgccgggacgccgcggcgtcgtcactggtcaag
ctccggcgcggagacgtcattgtgattcccagcgggcgacgggctggggtggcggcagtg
gtagagcccgatcgtgagttcgacgatccgcgcccgctggtgatcaccgattccgcctgg
gcggggcgggtgacactgcgtgatttcccgatccccgtgcagacgctcggtgctgtgcgc
ctgccgcgacatatcgacttccgctccgcacaggtccggcgcgaccttgcctccacattg
cggaacctggggtatacgccgccgcaccgggcgccaggccgcaagggccaaaaggccgcg
gcggcgaacgacaaggaacttgcccggatgcggcgcacgctgaaagcgcatccctgtcac
acctgtgaggagcgggaagaacacgcacgctggttcgagcggtacgaccggctcaaggct
gacaccgaccggctgcggcggcagatgaacctcgcttcctcttcgctggcccggacattc
gaccggatcgtcacgttactgaccgagcgcgggtacgtcagtgaggcgagcgacaccgcc
gattccactgtcactgaagagggcgagtggctgagccggatctacagcgaaagtgaccta
ctggtcgccgaggcgctgcgccgcggaatctggaaaggtcttggccctgccgagcttgct
gcaacagtgtcggccgtggttttcgagacccggagagaaggcgtcacggcaggtcatgtg
cccacagcgccgctgcggcgctcgctggcggacacgatgcgcatctgggaggaaatccat
tcagacgaactgaggcacaagctgccgacgatgcgtgaaccagacgctggtttcgtgcac
gccgcgtacctgtgggccaccgaggcgccgctcgttgaagcactccttgcagcgaacgaa
atctccgccggcgacttcgtgcgctggtgccggcaactcatcgatttgctggaccagatt
cggatagctgccccggaccgggaggtaaggtcaaccgcagggaaagccatcgcggccgtg
cgtcgtggagtagtcgccgtagatgctgacgagtag
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