Actinoplanes sp. SE50/110: ACPL_7114
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Entry
ACPL_7114 CDS
T02044
Symbol
rpoT
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ase
Actinoplanes sp. SE50/110
Pathway
ase02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ase00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACPL_7114 (rpoT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ase03021
]
ACPL_7114 (rpoT)
Transcription machinery [BR:
ase03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPL_7114 (rpoT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
AEV87994
UniProt:
G8SGV4
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All DBs
Position
7856093..7857679
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AA seq
528 aa
AA seq
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MAVPNLIASGRSFVTEAHQNGADVRSLTEALITHAQGAGGQLTSAQVAHTLESAAVNPAQ
AKKILRGLVDAGITVVVDGSASTRRKVAAARSATPASKATTAKTAAPVKKAAPAPKQAAA
PSTDPAKATPAARKAAPAKKAAVTAKAAPAKAAKPGEEGPEGEEIDPEELAAEIEDVVVE
EPPALVAAAATDAASSATDGDFEWDDEESEALKQARRDAELTASADSVRAYLKQIGKVPL
LNAEQEVELAKRIEAGLYAAERLRAAEEGEETLERNFERDLKWINRDGERAKNHLLEANL
RLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMA
DQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREP
ISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFSLLQDQLQQVLQTLSEREAGVVRLRFG
LTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcccaatctcatcgcctccggaaggtcattcgtgacagaagcccaccagaac
ggtgccgacgttcgctctctcaccgaggccctgatcacccatgcccagggtgcgggcggg
cagctcacttcggcccaggtcgcgcacacgctcgagtccgccgccgtcaacccggcacag
gccaagaagattctgcgcggcctggtggacgccgggatcacggtcgtggtcgacggctcg
gccagcacccgccgcaaggtggccgccgcccgctccgccaccccggcgtcgaaggcgacg
accgccaagaccgccgccccggtgaagaaggccgcgcccgccccgaagcaggccgccgcc
ccgtccaccgacccggcgaaggccacgccggccgcgcgcaaggcggccccggcgaagaag
gccgcggtcaccgccaaggccgccccggcgaaagccgccaagcccggcgaggagggtccc
gagggcgaggagatcgaccccgaggagctggccgccgagatcgaggacgtggtggtcgag
gagccgcccgcgctcgtcgcggccgccgcgaccgacgccgccagttcggccaccgacggc
gacttcgagtgggacgacgaggagtccgaggcgctcaagcaggcccgccgggacgccgag
ctgaccgcctcggccgactcggtccgcgcctacctcaagcagatcggcaaggttccgctg
ctcaacgcggagcaggaggtcgagctcgccaagcggatcgaggccggcctctacgccgcc
gagcggctgcgcgccgccgaggagggcgaggagacgctcgagcgcaacttcgagcgtgac
ctcaagtggatcaaccgggacggcgagcgggccaagaaccacctgctcgaggcgaacctg
cggctcgtggtctcgctggccaagcgctacaccggccgcggcatggcgttcctggacctg
atccaggagggcaacctcggcctgatccgcgccgtcgagaagttcgactacaccaagggc
tacaagttctcgacctacgcgacgtggtggatccggcaggcgatcacccgcgcgatggcc
gaccaggcccgcaccatccgcatcccggtgcacatggtcgaggtcatcaacaagctcggc
cgcatccagcgcgagctgctccaggacctgggccgtgagcccaccccggaggagctggcc
aaggaaatggacatcacgccggagaaggtgctggagatccagcagtacgcgcgtgagccc
atctcgctggaccagacgatcggcgacgagggcgacagccagctcggcgacttcatcgag
gactccgaggcggtcgtcgcggtcgacgcggtctccttctcgctgctgcaggaccagctc
cagcaggtgctgcagacgctctccgagcgggaggcgggcgtggtccggctgcggttcggc
ctgaccgacgggcagccgcggaccctggacgagatcggccaggtctacggcgtcacccgt
gagcggatccggcagatcgagtcgaagacgatgtcgaagctgcggcacccgtcacggtcg
caggttctgcgcgactacctcgactag
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