KEGG   Alteromonas stellipolaris LMG 21856: AOR13_2657
Entry
AOR13_2657        CDS       T04153                                 
Name
(GenBank) Exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
asp  Alteromonas stellipolaris LMG 21856
Brite
KEGG Orthology (KO) [BR:asp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asp03400]
    AOR13_2657
DNA repair and recombination proteins [BR:asp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AOR13_2657
    Archaeal homologous recombinant proteins
     AOR13_2657
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N AAA_21 ABC_tran cobW AAA_22 nSTAND3 NTPase_1 AAA_25
Other DBs
NCBI-ProteinID: ALM91661
UniProt: A0A0S1YMJ1
LinkDB
Position
complement(3063787..3067458)
AA seq 1223 aa
MKILTLRLKNLNALKGEWKIDFTQSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LGTISATSNDIMTRGTSECLAEVEFDIKGKAYRAFWSMRRARGKADGNLQSADVELAEVE
SGKVLATQVRPKSEEIERLTGLNFARFTKSMMLSQGDFAAFLNANEGDRAELLEELTGTE
IYGQLSQAIHEKYKAAETTKREFKLKLEGVALLSEAQHNELSAQLDQFKTQLLTINTEIV
SLQERHRWQQACEQNQHELTKANAALVEANSVYEQAKDELALLVAGEPAELLRLPHSALS
QLCEDVQRIAKNLTLKQQQLPDLESQQQTRQAEFENSETNFATAKAHQQRFETLINEQII
PIDTEINKLSNRIETNQQSLADAKFKQGKAQESHQAYYDELEGKKRMLDELTTYLNANAA
NGKMAGEISGWKEKAARFSDDENTLAELTQKITTTQQLKDSAEADLTEKQHYKTNVVLLH
QQSADNVSQCEANLNQLLSNGDAASVNADITALNNNWPVLASCEQWQRLYISHTNSHADK
AKRLTTLLSSIETLKQERAELAASYKATQSHLKDVESLIKLDAELAHLRQALSPGDACPL
CGATEHDASLMNIDVPETIAKRDELTRTLENIEKLGTQKREQISTAEFEKQQCEKVVAEA
KTAFSQLEADWQQAMLTLNARVEISDIESFNQLQLSCKERQSRLSAQLSNIQASEAKLAD
AKNDTLLHQQQIDSINSEIALLTAKTSQLEGQLHDLNNTKSKVESALVNNRRTLINEIER
VGLTPDANITKWLTQKHNDVEAFQEKTHLHNSLSHELKALESKLVELSEAKASADKETQL
YSTRIQETEAKREVLLTKRHALFPEADIGAARREIQNTLSAKEQIFKKCDTHLREAQRAL
ENATAQLKVLTVELEEKQQAKQVKQVAFDTALQQSPFADETEFLNALLPYEERQRLLQKK
QLIEREQQNAQLLLGNVTQKHNTLLAHERASEWQQSTVEATQVSLNQKGEEKDRLLAQQG
QLFQQLESNRQAVEKQQSLINEMREFETSYDDITYLHSLIGSASGDKFRRFAQGLTLDNL
VRLANQQLDRLHGRYQLTRNTKDSLGLSVLDTWQGDVVRDTKTLSGGESFLVSLALALAL
SDLVSFKTSIDSLFLDEGFGTLDAETLDVALDALDNLNASGKMIGVISHIEAMKERIPTQ
LKVIKRNGVGLSALEKCYSATEI
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgaaaattcttaccctcaggcttaaaaatttaaatgccttaaaaggagagtggaagata
gatttcacccaatctcctttcatcgacaacggcttgtttgccattaccggtcctactgga
gcgggtaaaacaacgttacttgatgctatttgtttagcgctctatcaccaaacgccacgc
ttgggcactatttcggccacctcgaacgatattatgactcgcggcacgtcagagtgcttg
gcagaagttgagttcgatataaagggcaaagcgtatcgcgcattttggagtatgcggcgc
gctagaggaaaagctgacggcaatttgcaatctgccgatgtggaattagcagaagtagaa
tctggtaaagtattggccactcaggtgagacctaagagcgaagagatagagcgccttact
gggcttaactttgcgcgctttacaaaatcgatgatgctatctcaaggtgatttcgctgcc
tttttaaatgcaaacgaaggcgacagggctgaattactagaagagcttaccggcactgag
atttatggccagttatctcaagcaattcacgagaaatataaagcagcagaaacgacaaaa
cgggaattcaagctaaagctagagggcgtagctttgctcagtgaagcgcagcataatgaa
cttagtgcgcagctggaccaattcaaaacccagctcctcactataaatactgagattgtc
tcgcttcaagagcgacatcgatggcaacaggcgtgtgagcaaaatcaacatgagctgact
aaggctaacgcggcattagttgaagcgaatagcgtttatgaacaggcgaaagacgaatta
gcgctattagtggccggcgagccagctgaattacttcgtttgcctcattctgcgcttagt
cagctttgcgaagatgtgcaacgtattgccaaaaatctcaccttgaaacagcagcaatta
cctgacctggaaagccagcagcaaactcggcaggccgaatttgaaaacagcgaaacgaac
tttgcgactgcgaaagcccaccaacagcgttttgaaaccttgatcaatgaacaaatcatt
ccgattgatactgaaatcaataagctttctaatcgtatagagacaaaccagcagtcatta
gcggatgcgaaatttaagcagggcaaggcgcaagaaagtcatcaagcatactatgatgaa
cttgaaggtaaaaagcgcatgctagatgagctaaccacctaccttaatgctaatgcggca
aatggtaaaatggcaggtgaaatcagtggttggaaagaaaaagcggcccgttttagcgat
gacgaaaatacccttgcagaattaacccaaaaaataacaacaacgcagcagcttaaagac
agcgctgaggctgacttaactgagaaacaacactacaaaacgaatgtggtgttgttacat
caacaaagcgcagataacgtttcacagtgtgaggctaacctcaatcaactacttagcaat
ggcgacgcggccagtgttaatgcagatataactgcgctcaataacaactggcctgttctt
gcttcttgcgaacaatggcagcggctttatatcagtcacacaaatagccatgcagacaaa
gccaaaagactaaccaccttgttatcaagtattgaaacccttaaacaagagcgagcagag
ttagcggcaagttataaagcaacgcaaagtcatttaaaagacgttgagtcgttaattaag
ctagatgctgagcttgctcatttgcgtcaagcgctctcgccaggcgatgcgtgccccttg
tgcggtgcaactgagcacgatgcttctttaatgaatatcgatgtgcccgaaactattgct
aagcgcgacgagttaacccgaacacttgagaatattgaaaagttgggtacgcaaaagcga
gagcaaatcagtaccgcagagttcgaaaaacagcagtgcgagaaggtggttgcagaggca
aaaactgccttttctcaactagaagccgactggcagcaggctatgttaacgttaaatgcg
agggttgaaatttcagatattgagtcatttaaccagcttcaacttagctgcaaagaacgt
caatctcgtttaagcgcacagcttagtaatatacaagctagcgaggctaaattggccgat
gccaaaaacgatacgcttttgcatcaacagcaaatagactctattaacagtgagatagcg
cttttaacagcaaaaacatcgcagctggaagggcagctacacgacttaaacaatacaaaa
tctaaagttgaaagtgcacttgtcaataaccgtcgcacacttattaacgagattgaaagg
gtggggttaacaccggatgcaaacataactaagtggcttactcaaaagcacaacgatgtg
gaagcgtttcaagagaaaacccatttacacaatagtttgtctcacgagttaaaagccctt
gaaagcaaattggttgagctaagcgaagctaaagcgtctgcggataaagaaacccagcta
tacagcacgcgtattcaagagactgaagcgaagcgcgaagtgctgcttactaaacgtcat
gctttattccccgaagcagatatcggcgctgctagacgtgaaattcaaaacaccctctcg
gcaaaagagcagatatttaaaaaatgtgatactcaccttcgtgaggcgcaacgagcgtta
gaaaatgctaccgcccagttaaaagtacttactgtagaattagaagagaaacaacaagcc
aaacaagtgaaacaagtcgccttcgataccgcattgcagcaaagcccatttgctgatgaa
accgagtttttaaatgcattattaccctatgaggagcgccagcgtttacttcaaaagaaa
cagttgattgagcgagagcagcagaatgcgcagttgttactgggtaacgtcacgcagaag
cacaacactctattagcacacgaacgcgcctctgaatggcaacaatcgactgttgaagcc
actcaggtcagcttgaatcaaaaaggtgaggaaaaagatcggttacttgcacaacaaggg
caactatttcaacaattagagagtaataggcaggcggttgaaaaacagcaaagcttaatc
aatgaaatgcgtgaatttgaaacttcgtatgatgatattacttatctacactcgcttatt
ggttcagccagtggagataaatttaggcgatttgcgcaaggtttaacgctagataatttg
gttcgacttgccaatcaacagctcgataggttgcacgggcggtatcaacttacccgcaac
acaaaagacagtttaggtttaagtgtattagatacgtggcagggtgatgtggtacgagat
actaaaacgctatcagggggcgaaagttttctggtgagtttagcgctagcgctggcactg
tctgatttagtgagctttaaaacaagcatagattctcttttcctcgatgaaggctttggt
acgctagatgccgaaaccctagacgtagcgttagatgcattagataacctaaatgctagc
ggtaaaatgattggtgttattagccacatagaagcaatgaaagaacgtattcctacccag
ctgaaagtcataaaacgaaatggagtagggttaagtgcgctggaaaaatgttactcagcg
acagaaatttga

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