Actinobacillus suis ATCC 33415: ASU1_04230
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Entry
ASU1_04230 CDS
T03246
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ass
Actinobacillus suis ATCC 33415
Pathway
ass03030
DNA replication
ass03410
Base excision repair
ass03420
Nucleotide excision repair
ass03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASU1_04230
03410 Base excision repair
ASU1_04230
03420 Nucleotide excision repair
ASU1_04230
03440 Homologous recombination
ASU1_04230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ass03032
]
ASU1_04230
03400 DNA repair and recombination proteins [BR:
ass03400
]
ASU1_04230
Enzymes [BR:
ass01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASU1_04230
DNA replication proteins [BR:
ass03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ASU1_04230
DNA repair and recombination proteins [BR:
ass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ASU1_04230
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASU1_04230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AIJ31116
LinkDB
All DBs
Position
complement(937783..940656)
Genome browser
AA seq
957 aa
AA seq
DB search
MATIAQNPLVLVDGSSYLYRAFHAFPPLTNKNGEPTGAMYGVLNMLKSLIAQVEPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEADDVIGT
LAVQAANDGKNVLISTGDKDMAQLVNDHIMLINTMNNTLLDREGVIEKYGIPPELIIDYL
ALQGDASDNIPGVKGVGEKTALGLLQGIGSLKEIYANLDQVATLSFRGAKTLAPKLEAEK
EAADLSYLLATIKTDVELEVTHEQLVVQSQKRDELVELFGRYEFKRWLNEVMNDANPVTQ
NSAEKIPNNYQATVSAPQAVETEQTFAKVEIDRSRYETVATMAQLQSWIEKINQAKLVAV
DTETDSLDSMSANLVGISFGLANGEACYIPLTHKEQVTLEPQQSDLFAEPAEVETTTSFE
LAKNQLNLTACLNELKPVLENDDVKKIGQNIKYDLTIFANHGVQVAGVAFDTMLESYTLN
STGRHNMDELADRYLGHKTIEFEEIAGKGKNQLTFDKIAIDVASQYAAEDADVTMKLHQV
LAPELDKAPTLVKLFNEIEMPLVEVLSRIERNGVLIDPEKLLAQSAEIEQRLAELEQLVH
SEAGEVFNLASTKQLQEILFTKLGLPVLKKTPKGAPSTNEEVLDELAGQGHLVPKLLMEH
RGLSKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEEGRRIR
QAFIANKGYKIVAADYSQIELRIMAHLANDEGMITAFAEGKDIHRATAAEIFGLALDQVT
SEQRRSAKAINFGLIYGMSEFGLSNQLGISRADAKKYMERYFQRYPAVQQFMTDIRESAS
EKGYVETLFGRRLYLPEIKSSNAMRRKAAERVAINAPMQGTAADIIKVAMIGIDKVIRGD
ENIKMIMQVHDELVFEVKEELIEHYSQLIKAEMEKAIQLKVPLIAEVGVGDNWDEAH
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggctacaattgctcaaaatccgctcgttcttgtggacggttcttcttatctttatcgt
gcgtttcatgcgtttccgccgctgactaataaaaatggtgagccgacgggagcgatgtat
ggcgtgttaaatatgctgaaaagtttaattgctcaggttgagccgagccatattgcggtg
gtttttgatgcgaagggtaagactttccgtgatgagttatttgagcaatataaatcgcat
cgtcctccgatgccagatgacttgcgtgcacaagtgcaaccgttacatacgattattaaa
gcgttaggcattccgctgatctcgattgaaggtgtagaagcggatgatgtgatcggtacg
cttgcggtgcaggcggcgaatgacggaaaaaacgtgttaatcagtaccggcgataaagat
atggcacaactggtgaacgatcacattatgctaattaataccatgaacaatactttgctt
gatcgtgaaggtgtgattgagaaatacggtattccgccagagctgattattgattattta
gcattgcaaggcgacgcttcggataatattcctggtgtgaagggcgtgggcgagaaaacc
gcattaggtttgctgcaaggaatcggctcattaaaagagatttatgcgaatttggatcaa
gtcgccacactttcattccgtggtgctaaaacacttgcaccgaaattagaagcggagaaa
gaagcggcggatttatcttatttgcttgccacgattaagaccgatgttgaactggaagtc
acccatgaacaattagtggtgcaatcacaaaagcgtgatgaattagttgagttgtttgga
cgttatgaatttaagcgctggctgaatgaagtgatgaatgacgctaacccggtcacgcaa
aattcagcggaaaaaattcctaataattatcaagcgactgtttcagcaccgcaagcggtc
gaaaccgagcaaacttttgcaaaagtggagattgatcgtagcagatatgaaacggtagcc
acaatggcgcagttgcagagttggattgaaaagatcaaccaagcaaaattagtggcggtg
gataccgaaaccgatagtttggactctatgtcggcaaatttagtcggaatttcatttggc
ttggctaacggcgaagcgtgctatattccgttaacgcacaaagaacaggtaacgcttgag
cctcagcaaagcgatctgtttgccgagccggcagaagtggaaactaccacaagctttgaa
cttgcaaaaaatcagctaaatttgaccgcttgtttgaatgagcttaagccggtattagaa
aatgatgatgtgaaaaagatcgggcaaaatattaaatacgatctgactattttcgcaaat
cacggtgtgcaggtggcaggtgttgcattcgatacgatgctggaatcttatacgctaaat
agtaccggtcgtcataatatggacgaattagcggatcgctatttagggcataagacgatt
gagtttgaagaaattgctggtaagggcaaaaatcagctgacattcgataaaattgcgatt
gatgtcgcttcacaatatgcggcggaagatgcggatgtgacgatgaaattacatcaagtg
cttgcgccggaattggataaagcgccgacattggttaaattgtttaatgaaattgaaatg
ccgttggttgaagtgctttctcgcattgagcgtaacggtgtattgattgatccggaaaaa
ttactggcgcaatcggcagaaattgagcagcgtttagctgagttggaacagttagtgcat
agtgaagccggtgaagtctttaatcttgcttctaccaaacaattacaagaaattttattt
actaaacttggcttacctgtcttgaaaaaaacaccgaaaggtgcgccttctaccaatgaa
gaagtgttggatgaattagcggggcaagggcatttagtgccgaaattattaatggaacat
cgtggcttaagtaagttgaaatcgacttataccgacaagttaccattaatgattaatcca
aaaacaggcagagtgcatacctcttatcatcaggcagtaacggcgaccggtcgtctttca
tcaagtgatccgaatctgcaaaatattccgatccgaaatgaggaaggcagacgtattcgc
caagcatttattgcgaataaaggctataaaattgtcgcagccgactattcacaaatcgaa
ttgcgtattatggcgcatttagcaaatgatgaaggtatgattaccgccttcgctgaaggt
aaagatattcaccgtgcaacagcagcggaaattttcggtttagcgttggatcaagtaaca
agtgagcaacgccgtagtgctaaggctattaatttcggtttaatttacggtatgtcggaa
ttcggtttatcaaaccaattaggcatttcacgtgccgatgcgaaaaaatatatggaacgt
tatttccaacgttatccggcagtgcaacaatttatgaccgatattcgtgaaagtgcgagt
gaaaaagggtatgtggaaacacttttcggcagacgtttatatttaccggaaattaagtcc
agtaatgcaatgcgccgtaaagcggcggaacgtgtggcgatcaatgcaccaatgcaaggc
actgcggcggatattattaaagtcgcaatgattggcattgataaagtgattcgaggcgat
gaaaatatcaaaatgattatgcaagtgcatgatgaattggtgtttgaagtaaaagaagaa
ttgatcgaacattatagccaattaattaaagcggaaatggaaaaagcgattcagcttaaa
gtgcctttaattgcagaagtcggcgtgggcgataactgggacgaagcgcactaa
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integrated database retrieval system
