Actinobacillus succinogenes: Asuc_1182
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Entry
Asuc_1182 CDS
T00558
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
asu
Actinobacillus succinogenes
Pathway
asu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Asuc_1182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asu03400
]
Asuc_1182
Enzymes [BR:
asu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Asuc_1182
DNA repair and recombination proteins [BR:
asu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Asuc_1182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
SLFN-g3_helicase
ResIII
AAA_12
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABR74546
UniProt:
A6VNJ9
LinkDB
All DBs
Position
1334659..1338342
Genome browser
AA seq
1227 aa
AA seq
DB search
MPVQHLNPISTPLQTTTLIEASAGTGKTFTMASLYLRLLLQAGDNAFSVPLTVEQILVVT
FTEASTEELKERIRARIHLAKAQFAAYRETQDLTVFLNTDNEFLVKENGQLTDRFLAKLD
PNEAFRRLGFAEQNMDLAAVYTIHGFCRRMLMQYAVNSGIHFNLELVTDETDLLNRLAND
FWREQFYGQSFVVTEFIHRKLESPQQVLKKIRAYLKGETLKVSVNRPHLLTMSTAEFLQQ
ELAVHLAGSDNIPDELKSAWTDNFAEISALFEANYAGASVFNGNKFKRDYFIARTAKIQA
WADSERRDIPDELWYFTQDYLNGAVLKGKTAFSHPFFDYLAEQKARIEAAQTQLDLDEKI
LLFHYLRTLNERLSAYKRHHPEKSFDDLLRLLKNALQSERGEQLATFIRHQYPFAMVDEF
QDTDEQQYQIFSAIYVNRPDCGFMMIGDPKQAIYQFRGADIFTYLKAAKDAEQERFTLSK
NYRSDGSLIRAVNGLFDFPAAFMYDDIRFEPVAAGKDQAHFVWRGAQQAPMAFYLGSREQ
AAEYCADNIRQWLTSADENQAGFVMDTAQDNGRNLRLRPENIAVLVRKGSDAEKIKSALQ
RRGIASVYLSDRTNVFDCAEARELAFILAACLNPFSERHIMNALATGIFAFSMAQLQQIK
RQAELLDGWMTRFEDYQRIWRRQGVLPMLHRIFLDKGKRGEQADIVGQIAAQANAERRLT
DLLHLAELLQEAAVLHESESALLSWFERQIQGKDRQAEQQVRLESERNLVKIVTIHKSKG
LEYDLVWLPFLGFDDVKNRDEISIFHDKDAEALWDMNARHQDISAKEKLAEEMRLLYVAL
TRAKYQVAMALPAEFGGKKESYWNPVWYALSRGEIGDGMKITGKAEKQTAVLLSAHLEAE
NYTLETIPETVSGDKWLPQTNAEVSLSAATFTGKIEQNWGVTSFTALSRMHEQNRRFHGE
ESAVEFTAIFDDALDYDEQQDVFSPTDEEANALWRNLPAEYSPLALKGGAKFGVILHRFF
EKHDFSQPIEDAELLALCQGLQLDETWIQPLKMWLEAVLTTPLSAGFKLTDIRPQHCLKE
MQFYLNLDRTFDVKAFNLLLRQYHPLYQQPYLLDDIRGMLRGFIDLVYRHDGKYYLLDYK
TNLLPAYSEERIRTDIQQHYYDLQYLLYSLALHCFLQRRLPAYDYETHFGGVIYAYVRGM
DGSGKTGVFTTRPAARLIRGLEELLHA
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgccggttcaacatttaaatccaattagtacaccgttgcaaactacaacattgattgaa
gcgtccgccggtaccggcaaaacctttaccatggcgtcgttgtatctgcgtttactgttg
caggcgggggacaatgccttttcggtaccgttgacggtggaacagattctggtggtcacc
tttaccgaagcgtcgaccgaagaactgaaggagcgcattcgcgcccgtattcatctggcg
aaagcgcaatttgccgcttaccgagaaacgcaggatttaaccgtgtttctcaatacggat
aacgagtttctggtgaaagaaaacggacaattgacggatcgttttctggcaaaattggat
ccgaatgaggcgtttcgtcgcctcggctttgccgagcagaatatggatcttgccgccgtt
tacaccattcacggtttttgccgtcgtatgttaatgcagtatgcggtgaattccggcatt
cactttaacttggagctggtgacggacgaaacggatttattgaaccggctggcaaacgat
ttttggcgggaacagttttacggacagtcttttgtcgtaacggaatttattcaccgtaaa
ctggaatcgccgcagcaggtattaaaaaagatccgcgcttatttaaaaggggaaactcta
aaagtatcggtaaaccgaccgcacttgttaaccatgtccaccgccgaatttttgcaacag
gaattggcggttcatttagccggttccgataatattcctgacgaattaaaatccgcctgg
acggataattttgctgaaatttccgctttatttgaggcgaattatgccggcgcttcagtg
tttaacggtaataaattcaaacgggattattttattgcccgcacggcgaaaattcaggcg
tgggcggacagcgaacgccgcgatattcccgacgaactttggtattttacgcaggattat
ctaaacggcgcggtattaaaaggcaaaacggcgtttagtcatccgttttttgattattta
gcggaacaaaaagcccgaatcgaagcggcgcagacccaactggatttagatgaaaaaatt
ctattgtttcattatttgcgaacattgaatgaacgattatcggcttacaagcggcatcat
ccggaaaagagttttgacgatttgctgcggctgttaaaaaacgcattgcaatcggaacgg
ggcgaacagttggcgacgttcattcgtcatcaatatcctttcgcgatggttgatgaattt
caggatacggacgaacagcaatatcaaattttttccgctatttatgtgaatcggccggat
tgcggattcatgatgataggcgatccgaaacaggcgatttatcaattccgcggcgccgat
atatttacttatctaaaagcggcgaaggacgccgaacaggagcgtttcaccttaagcaaa
aattatcgttccgacggtagtctgattcgggcggtgaacggtttgttcgattttcccgcc
gcatttatgtacgacgatattcggttcgagccggtggcggcgggcaaagatcaggcgcac
tttgtgtggcggggcgcacaacaggcgccgatggcgttttatctaggctcgcgcgaacag
gcggcggaatattgtgccgacaatattcggcagtggttaacaagtgcggatgaaaatcag
gccggatttgttatggatacggcgcaggacaacggccggaatcttcggcttcgccctgaa
aatattgccgtgttggtgcgcaagggcagtgatgcggagaaaatcaaatccgccctgcaa
cgacgcggtatcgcttccgtttatttgtcggatcgcaccaatgttttcgactgtgcggag
gcgcgggaattagcgtttattctggcggcctgtcttaatcctttcagtgaacgtcatatt
atgaatgccttggcgacaggtatttttgctttttctatggcgcaattacagcaaattaaa
cggcaggccgaattactggacggttggatgacgcgtttcgaagattatcagcgcatctgg
cgccggcaaggcgtgttgccgatgttgcaccggatttttctggataaaggtaaacggggc
gagcaagccgatatcgtcggacaaattgccgctcaagccaatgcggaacggcgtttaacg
gatttattgcatttagccgaattgctgcaggaagccgccgtcttacatgaaagcgaatcc
gctttattgagctggtttgaacgtcagattcaggggaaagatcggcaggcggaacagcaa
gtgcggttggaaagtgaacggaatttggtgaaaatcgtcaccatccataaatccaaaggg
ctggaatacgatttggtgtggctgccgtttttggggttcgacgatgtgaaaaaccgggat
gagatttccatcttccatgataaagacgccgaggcgctgtgggatatgaacgcgcggcat
caggatatatcggcgaaagaaaaactggcggaggaaatgcgtctgttatatgtggcgctg
acgcgggcaaaatatcaagtggcgatggcattaccggcggaattcggcggcaaaaaggaa
tcttattggaatcccgtttggtacgctttgagccggggcgaaatcggcgacggtatgaaa
attacgggtaaggcggaaaaacaaacggcggttttattatccgctcatttggaggcggaa
aattatacgctggaaactatccccgaaaccgtttccggcgataaatggctgccgcagacg
aatgccgaagtgtccctttcggcggcaacctttaccggtaaaatcgaacaaaattggggc
gttaccagtttcaccgcattaagccgaatgcatgaacaaaaccggcgttttcacggggaa
gaaagtgcggtcgaatttactgcgatttttgatgatgcgctggattatgacgaacaacag
gatgtgttttcaccgactgatgaggaggcgaacgctttgtggcggaatttgcctgcggaa
tacagcccgttggcattaaaaggcggtgcaaaattcggggtgattctgcatcgcttcttc
gaaaaacatgatttttcccaacccattgaggatgccgaactgcttgccctttgccaaggt
ttgcagctggacgaaacctggattcagcctttaaaaatgtggcttgaagcggtgttaact
acgccgttgtcggcgggcttcaaattaacggacatccgcccgcaacattgcttgaaagaa
atgcaattctatttgaatttagaccgcacttttgacgtgaaagcctttaatctgctgcta
cggcaatatcatccgctgtatcagcaaccttatctgttagatgatattcggggcatgctg
cgcggatttatcgatctggtttaccgccacgacggcaaatattatctgctggactataaa
accaatttattacccgcatacagtgaagaacgtattcggacggatatacaacagcattat
tatgatttgcagtatttgctgtacagcttggcgttacattgttttctgcaacggcgtctg
cccgcttatgattacgaaacccatttcggcggcgtcatttatgcttacgtacgcggcatg
gacggcagcggcaagacgggcgtttttacaacccgtcccgccgcacgtttgattcgcgga
ttggaggaattgctgcatgcttaa
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