Agrobacterium tumefaciens S33: AWN88_03850
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Entry
AWN88_03850 CDS
T04213
Name
(GenBank) peptide ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWN88_03850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ata02000
]
AWN88_03850
Transporters [BR:
ata02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AWN88_03850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AMD57393
LinkDB
All DBs
Position
circular:complement(859558..861153)
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AA seq
531 aa
AA seq
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MKMPVVSSRLAALALGTALALPIFSSAALAEDKVSVAVNTMQIFSSLDPAKVTDYTGYMA
IVNMYDGLTTVNAKGEIVPHLAKSWEISADGLTYTFHLRDDAKFQDGTAVKAADLAWSIQ
RLLGINKGPSNLIVGVLKPENVTAPDDATLVMKIERQFSPFMAATPLMMAMNKTLIEANA
KPEDKWGEAYVGEHSAGSGPYKLVSYNRSADMVIARNADYFLGWTKGKPIDEVRFVQTSD
DATVKALAEKGELGLSSHGLGNDTYESIGRMKGYKLIQTRTAGGFVIKLNTKVYPTDDVH
VRRAIAYATDYKTIQEVIYPGFDMKGPLSDAFKDAHNGDIQPGIYDLEKAKEELAKSKYA
GQKITLVNSYVASLAFEAEVALLLQSSLEQIGITLDIKPEPWNRIVELSSKPETTPASTQ
VNISPTYPSPDSMFYNQYHSKASGTWMSMEWLQNAEIDGLIDKVRATTDVNEQNATYKEL
QTKIVDLQPDVWAVAPNRRYAANKCLQGYEFIPMQSWDLNFSNFHWDCKAE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcctgtagtttcttcccgtctcgccgcgctggcactcggcacggcgcttgcg
ttgccgattttttcttctgcagcccttgcggaagacaaggtgtcggtcgcggtcaacacc
atgcagatattcagctcgctcgaccctgcgaaagtgactgactataccggctacatggcc
atcgtgaacatgtatgacggtctgaccacggtaaacgccaagggcgaaatcgtgccgcat
ctggcgaaatcctgggagatttccgcggacggcctgacctacaccttccacctgcgcgac
gatgcgaagttccaggacggtacggcagtgaaggcggccgatcttgcctggtcgatccag
cgcctgctcggcatcaacaagggcccgtcgaacctcatcgtcggcgtgctgaagcccgaa
aacgttaccgcgcctgacgatgccacgctggtcatgaagatcgaacgccagttctcgccc
ttcatggcggcgacgccgctgatgatggcaatgaacaagacgctgatcgaagccaatgcc
aagcccgaagacaaatggggtgaggcttatgtcggcgaacattccgccggttccggcccc
tacaagttggtcagctacaaccgctccgccgacatggtcatcgcccgtaacgccgattat
ttcctcggctggaccaagggcaagccgatcgatgaagtacgcttcgtgcagaccagcgac
gacgccaccgtcaaggcgttggcggaaaagggcgagctcggcctttcctcgcacgggctc
ggcaacgacacctatgaatccatcggccggatgaagggttacaagctgatccagacccgc
accgccggcggtttcgtcatcaagctcaacaccaaggtctatccgaccgacgacgtccac
gttcgtcgcgccatcgcctatgcgaccgactacaagacgatccaggaagtgatctatccg
ggcttcgatatgaagggaccgctctctgacgcgttcaaggacgcgcataatggcgatatc
cagcccggtatctacgatctggaaaaagccaaggaagagctggcgaagtcgaaatatgcc
ggccagaaaatcacgctcgtcaacagctatgtcgcgtcgctcgcctttgaggcggaagtg
gcgctgcttctgcagtcgagcctcgagcagatcggcatcacgctcgatatcaagcctgag
ccgtggaaccgtatcgtcgagctttcttccaagcccgaaacaacgccggcatcgacgcag
gtgaacatctcgccgacctatccgtcgccggattcgatgttctacaaccagtatcattcc
aaggcatccggcacctggatgtcgatggaatggctgcagaacgcggaaatcgacgggctg
atcgacaaggttcgcgccaccaccgacgtcaacgagcagaacgctacctacaaggagctg
cagacaaagatcgtcgatcttcagcctgacgtctgggcggttgcgccgaaccgccgttat
gcggcgaataagtgccttcagggttacgagttcattcccatgcagagctgggatctgaac
ttttcaaacttccattgggactgcaaagcggagtga
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