Agrobacterium tumefaciens Ach5: Ach5_10420
Help
Entry
Ach5_10420 CDS
T03816
Symbol
uvrC
Name
(GenBank) excinuclease ABC chain C
KO
K03703
excinuclease ABC subunit C
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ach5_10420 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_10420 (uvrC)
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ach5_10420 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
AKC06819
UniProt:
A0AA86FW88
LinkDB
All DBs
Position
circular:complement(1069830..1071881)
Genome browser
AA seq
683 aa
AA seq
DB search
MNGKKLPDGGILFDETDDEDDDANLAATDAAEAPRDVAGMDWNAGWKNESGLKGMDLIGE
FVKHLPNSPGVYRMFNEANDVLYVGKARSLKKRVGNYAQGRVHSNRIAQMVRLTAHMEFV
TTRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITADNRAPAIFKHRGARARKGDY
FGPFASAGAVGRTINSLQRAFLIRTCTDSVFETRTRPCLLYQIKRCSGPCTHEVSDEGYA
ELVKEAKDFLSGKSQSVKTAIARQMNEAAEDLDFERAAVYRDRLAALSHVQSHQGINPAG
IEEADVFAIHHEGGISCIQVFFFRTGQNWGNRAYFPKADPSLPGSEILNAFLAQFYDDKP
VPKQILLSETVEEQELLAAALGEKAGHKVTISVPQRGEKKDITDHVLANAREAHGRKLAE
TSSQARLLKGFAETFNLPYVPRRIEIYDNSHIMGTNAVGGMVVAGPEGFVKNQYRKFNIK
STDITPGDDFGMMREVMTRRFSRLLKEEGKPDRAQTLTSTPEEAADMPFPAWPDVILIDG
GQGQMTAVRAILDELDIRDSVIAIGVAKGVDREAGRERFFADGRSDFSLPPRDPVLYFIQ
RMRDEAHRFAIGSHRARRKKEMVRNPLDEISGIGPGRKRSLLQHFGTAKAVSRAGLNDLM
NVTGISEAVARQIYNHFHESSGD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaagaagctgcctgacggcggtattctcttcgatgaaaccgatgacgaagac
gacgatgcaaaccttgccgcgacagacgcggccgaggcaccgcgcgacgttgccggcatg
gactggaatgccggctggaaaaacgaatccggcctgaagggcatggatctgatcggcgaa
ttcgtcaaacacctgccgaactcgccgggtgtctaccgcatgttcaacgaggcgaacgac
gttctctacgtcggcaaggcgcgctcgctgaagaagcgcgtcgggaactatgcccagggt
cgcgtgcattccaaccgcattgcgcagatggtgcggctgaccgcacatatggaattcgtc
accacccgcacggaaaccgaggcgcttctcctggaagctaacctcatcaaacgcttgcgg
ccgcgctttaacgtgcttttgcgcgacgacaagtcatttccctatatcctgatcacagca
gacaatcgtgcaccggcgattttcaagcaccggggtgcgcgggcgcgcaagggcgactac
ttcggacccttcgcctctgccggagccgttggacgcacgatcaattcactgcaacgcgcg
ttcttgatccgcacctgcaccgacagcgttttcgaaacccgcacgcgtccctgtcttctt
taccagatcaaacgctgttccggcccctgcacacatgaggtgagcgatgaggggtatgcg
gaactcgtcaaggaagccaaggatttcctgtccggcaagagccagagcgtcaagaccgcg
attgcccggcagatgaacgaggcggccgaggatctcgacttcgagcgcgccgccgtctat
cgcgaccggctggcggcgctctcgcacgtccagagccatcagggcatcaatccggccggc
atcgaggaggcggatgttttcgccatccatcacgagggcggcatatcctgcatccaggtg
ttctttttccgcaccggccagaactggggcaaccgcgcttatttcccgaaggccgacccg
tccttgcccggctcggaaatcctcaatgcgttcctggcgcagttttacgacgacaaaccg
gtgccgaagcagatcctgctttccgaaaccgtggaggaacaggaattgctggccgctgct
cttggcgaaaaagccggacacaaggtcacgatcagcgtgccgcagcgcggcgagaagaag
gacatcaccgaccatgttcttgccaatgcccgcgaggcgcatggccgcaagctggcggaa
acctcgtctcaggcgcggttgctgaaggggttcgcggaaaccttcaaccttccctacgtg
ccgcgccggatcgagatttacgacaactcgcacatcatgggcaccaatgccgtgggcggc
atggtggtggcggggccggaaggcttcgtgaaaaaccagtatcgcaagttcaacatcaaa
tcgaccgacatcactcccggtgacgacttcggcatgatgcgtgaggtcatgacccgccgc
ttctcgcgcctgttgaaggaagagggcaagcccgaccgcgcgcagacgctgacgtccaca
cccgaggaagccgcggacatgcccttccccgcctggccggacgttatcctgatcgatggt
ggtcagggacagatgacggcggtgcgtgccatcctcgatgagctcgacattcgcgacagc
gtgattgccatcggcgtcgccaagggtgtggaccgcgaggcgggccgcgagcgcttcttt
gcggatggccgcagcgatttttccctgccgccgcgcgatcccgtgctttacttcatccag
cgcatgcgcgacgaggcccaccgttttgccatcggctcacaccgggcgcggcgcaagaag
gaaatggtgcgcaatccgctagatgaaatttcggggatcggcccaggacgcaagcgctcg
ctgctgcagcatttcggtacggccaaggcggtttcacgcgcaggcctcaacgatctgatg
aatgttaccggcatttcagaagccgtagcgcggcaaatctacaatcacttccatgagagc
agtggcgattga
DBGET
integrated database retrieval system