Agrobacterium tumefaciens Ach5: Ach5_19780
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Entry
Ach5_19780 CDS
T03816
Symbol
ddlB
Name
(GenBank) D-alanylalanine synthetase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00470
D-Amino acid metabolism
atf00550
Peptidoglycan biosynthesis
atf01100
Metabolic pathways
atf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ach5_19780 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ach5_19780 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ach5_19780 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
atf01011
]
Ach5_19780 (ddlB)
Enzymes [BR:
atf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Ach5_19780 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
atf01011
]
Precursor biosynthesis
Amino acid ligase
Ach5_19780 (ddlB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
GARS_A
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AKC07754
LinkDB
All DBs
Position
circular:complement(2017177..2018103)
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AA seq
308 aa
AA seq
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MGGKHVAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGRDIAAVLGELRPDVAF
NALHGPFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVADERVMNR
FEFTSEHPLAPPYVVKPVREGSSFGVVIVKEDQSHPPQILTSSEWRYGDQVMVERYIHGR
ELTCGVLNGEALGVTEVVPLGHNFYDYDAKYAAGGSKHVIPAEISPKIYQKIQTLAVMAH
RAIGCRGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGNLVSWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaagcacgtagctgttcttttgggtgggttttcgtcggagcggccggtcagc
ctctcgtccgggaacgcttgcgcgctcgcccttgagggcgaggggtacaaggtcacccgg
gtcgatgtggggcgcgatatcgccgccgtactcggcgagctgcgcccggatgtcgccttc
aatgcgctgcatggccccttcggtgaagacggcaccattcagggcattctcgaatatctc
gccattccctatacccattccggcgtgctcgcttctgcacttgccatggacaaggcgcag
gccaagaaagtggctgcggctgctggcattccggtggctgacgaacgcgtcatgaaccgg
ttcgaattcaccagcgaacatccgcttgcgccgccctacgtcgtcaagccggtgcgcgaa
ggctcgagcttcggtgtggtgatcgtcaaggaagaccagtcgcatccgccgcaaatcctt
acctcgtccgaatggcgttacggcgaccaagtcatggtcgagcgttacatccatggtcgc
gaactgacctgcggcgtgctcaacggcgaggcgctaggtgtgacggaagtggtgccgctg
ggtcacaatttctatgattatgacgctaaatacgcagccggtggctcaaagcatgtcatt
ccggcagaaatttcaccaaaaatttaccaaaaaattcaaacactggcggttatggcgcat
cgggcgatcgggtgccgtggcgtaagccgttcagactttcgttacgacgaccgcttctca
gaagatggcgaagttatctggcttgaagtgaatacgcagccgggcatgacgccgacctcc
ctggtgccggaaatggcggcccatgctggccgctcctttggtaaccttgtcagctggatg
gtggaggacgcttcgtgtttgcggtga
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