Arabidopsis thaliana (thale cress): AT1G08260
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Entry
AT1G08260 CDS
T00041
Symbol
TIL1
Name
(RefSeq) DNA polymerase epsilon catalytic subunit
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03030
DNA replication
ath03410
Base excision repair
ath03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT1G08260 (TIL1)
03410 Base excision repair
AT1G08260 (TIL1)
03420 Nucleotide excision repair
AT1G08260 (TIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ath03032
]
AT1G08260 (TIL1)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT1G08260 (TIL1)
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT1G08260 (TIL1)
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
AT1G08260 (TIL1)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
AT1G08260 (TIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
837346
NCBI-ProteinID:
NP_172303
TAIR:
AT1G08260
UniProt:
F4HW04
A0A654E847
LinkDB
All DBs
Position
1:2588854..2606892
Genome browser
AA seq
2161 aa
AA seq
DB search
MSGDNRRRDRKDTRWSKKPKVVNTAEDELESKLGFGLFSEGETRLGWLLTFSSSSWEDRD
TGKVYSCVDLYFVTQDGFSFKTKYKFRPYFYAATKDKMELELEAYLRRRYERQVADIEIV
EKEDLDLKNHLSGLQKKYLKISFDTVQQLMEVKRDLLHIVERNQAKFDALEAYESILAGK
REQRPQDCLDSIVDLREYDVPYHVRFAIDNDVRSGQWYNVSISSTDVILEKRTDLLQRAE
VRVCAFDIETTKLPLKFPDAEYDQIMMISYMVDGQGFLIINRECVGEDVEDLEYTPKPEF
EGYFKVTNVKNEVELLQRWFYHMQELKPGIYVTYNGDFFDWPFIERRASHHGIKMNEELG
FRCDQNQGECRAKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRF
AMEKPQTMASYSVSDAVATYYLYMTYVNPFIFSLATIIPMVPDEVLRKGSGTLCEMLLMV
EAYKANVVCPNKNQADPEKFYQNQLLESETYIGGHVECLESGVFRSDIPTSFKLDSSAYQ
QLIDNLGRDLEYAITVEGKMRMDSISNYDEVKDEIKEKLEKLRDDPIREEGPLIYHLDVA
AMYPNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGVTFMGKKSDYYHLKK
QIESEFVDAGANIMSSKSFLDLPKVDQQSKLKERLKKYCQKAYKRVLDKPITEVREAGIC
MRENPFYVDTVRSFRDRRYEYKTLNKVWKGKLSEAKASGNSIKIQEAQDMVVVYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIERIGKPLELDTDGIWCC
LPGSFPENFTFKTIDMKKLTISYPCVMLNVDVAKNNTNDQYQTLVDPVRKTYKSHSECSI
EFEVDGPYKAMIIPASKEEGILIKKRYAVFNHDGTLAELKGFEIKRRGELKLIKVFQAEL
FDKFLHGSTLEECYSAVAAVADRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQ
KSCAVTTAKRLAEFLGVTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFTTNPEVMKFH
LRKWCKTSSDVGIRLIIDWSYYKQRLSSAIQKVITIPAAMQKVANPVPRVLHPDWLHKKV
REKDDKFRQRKLVDMFSSANKDVVLDTDLPVTKDNVEDIEDFCKENRPSVKGPKPIARSY
EVNKKQSECEQQESWDTEFHDISFQNIDKSVNYQGWLELKKRKWKVTLEKKKKRRLGDLR
SSNQVDTHEINQKVGQGRGGVGSYFRRPEEALTSSHWQIIQLVPSPQSGQFFAWVVVEGL
MLKIPLSIPRVFYINSKVPIDEYFQGKCVNKILPHGRPCYSLTEVKIQEDQFKKESKKRA
ALLADPGVEGIYETKVPLEFSAICQIGCVCKIDNKAKHRNTQDGWEVGELHMKTTTECHY
LKRSIPLVYLYNSTSTGRAIYVLYCHVSKLMSAVVVDPFNGNELLPSALERQFRDSCLEL
SLDSLSWDGIRFQVHYVDHPEAAKKIIQRAISEYREENCGPTVAVIECPDFTFMKEGIKA
LDDFPCVRIPFNDDDNSYQPVSWQRPAAKIAMFRCAAAFQWLDRRITQSRYAHVPLGNFG
LDWLTFTIDIFLSRALRDQQQVLWVSDNGVPDLGGINNEEAFFADEVQQTSLVFPGAYRK
VSVELKIHNLAVNALLKSNLVNEMEGGGFMGFEQDVNPRGINSNDNTSFDETTGCAQAFR
VLKQLIHSCLTDVRKSKNIYADSILQRLSWWLCSPSSKLHDPALHLMLHKVMQKVFALLL
TDLRRLGAIIIYADFSKVIIDTVKFDLSAAKAYCESLLSTVRNSDIFEWILLEPVHYWHS
LLFMDQYNYAGIRADDEISLDEVTIEPKWSVARHLPEYIERDFIIIIAKFIFDPWKFAIE
NKKGSSESLEAQMIEYLREQIGSTFINMLVKKVDDIMSHMKEINVSDASRVSGQAPKGDY
SLEFIQVISAVLALDQNVQQDVLVMRKSLLKYIKVKECAAEAEFLDPGPSFILPNVACSN
CDAYRDLDICRDPALLTEKEWSCADTQCGKIYDREQMESSLLEMVRQRERMYHMQDVVCI
RCNQVKAAHLTEQCECSGSFRCKESGSEFSKRMEIFMDIAKRQKFRLLEEYISWIIYGPS
Y
NT seq
6486 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagataatcgaagacgggatcgaaaggatacgcggtggtcgaagaagcctaag
gtagtgaacactgcggaagatgaactcgaatctaaactcggatttgggcttttctctgaa
ggtgaaacccgacttgggtggttactcacattctcatcgtcatcttgggaagatcgcgat
actgggaaagtctatagttgtgtggacctttactttgttactcaggacggcttttctttc
aagacaaagtacaagttccgtccttacttttatgcagccacgaaagacaaaatggaattg
gaactcgaagcctacttgagacgccgatatgaaagacaagttgctgatattgagattgtt
gaaaaagaagatcttgatcttaaaaatcatctatctggcctgcaaaaaaaatacctaaaa
atatcatttgatactgtgcaacaattgatggaagtcaagcgggatttgttacatattgtc
gaacgaaaccaggcaaaatttgatgcacttgaagcatacgaatccatattggctggaaaa
cgagaacaacgtcctcaagattgcttagactctatcgtggacctccgcgagtacgatgta
ccttatcatgttcgatttgcaattgataatgatgtgcggagtgggcaatggtacaatgtc
agtatttccagcaccgatgtcatattggagaagaggacagatcttcttcaacgcgcagaa
gtccgtgtttgtgccttcgatatagagacaacaaagcttccgttgaagtttcctgatgct
gaatatgatcaaattatgatgatatcctacatggtcgatgggcaaggttttctaattatt
aacagagagtgtgttggcgaagatgtagaagatctggaatatacaccaaaaccagaattt
gaagggtatttcaaagttactaatgttaaaaatgaggttgaactcctccaaagatggttt
taccatatgcaagagttgaaacccggtatttatgttacatacaacggtgacttttttgac
tggccatttatagaacggagagcatctcatcatgggataaaaatgaatgaggaattggga
ttccgttgtgatcagaatcaaggtgaatgtcgagctaaattcgcttgtcatttggattgt
tttgcttgggttaaacgtgatagctatcttcctcagggaagccatggtctgaaggctgtt
acaaaggcaaaactaggttatgatccactggaagtgaacccagaggacatggttcggttt
gcgatggaaaagccccagacaatggcctcctactctgtctctgatgctgttgcaacttat
tacctatacatgacatatgtcaatccattcattttttctctcgcaactatcatcccaatg
gtccctgatgaggttttacgtaaagggagtggcaccctttgtgaaatgcttctgatggtt
gaggcttacaaggcaaatgttgtatgtcccaacaaaaatcaagctgaccctgagaaattc
taccaaaatcaacttcttgaaagtgagacatatattggtggtcatgtagagtgccttgaa
agtggtgttttcagatctgacattccaaccagttttaaactcgattcatcggcataccag
caactgatcgataaccttggtcgtgatctggaatatgctatcactgtagaaggaaaaatg
agaatggattcaatttccaattatgatgaagtgaaggacgaaatcaaggagaagcttgag
aagttacgagatgaccctatacgggaagaggggcctcttatttatcaccttgatgtcgca
gccatgtatccaaatatcatcttaacaaacaggcttcagccaccatcaatagttacggat
gagatttgcacagcatgtgatttcaaccgcccgggaaagacctgtcttagaaaacttgaa
tgggtttggcgtggtgtgacattcatgggaaagaaaagtgattattaccatttgaagaag
cagattgagtctgaatttgttgatgctggtgcaaatataatgtcttcaaaatcgttcctt
gatctgccaaaggtggatcaacaatctaagctaaaagaacgactaaaaaaatattgtcaa
aaggcttataaacgagtacttgacaagccaattactgaagttcgtgaagctgggatatgc
atgagagaaaaccctttctatgtggatactgttcggagctttcgagataggaggtatgaa
tacaaaacacttaacaaggtctggaagggaaaattgtcagaggccaaggcaagtggtaat
tcaatcaagatccaggaagcacaggacatggtagtggtttacgattccttgcagctagct
cataagtgtatacttaattccttctatggatatgtcatgcgaaagggtgcaagatggtat
tccatggaaatggctggtgtagttacctatactggagccaaaatcatacagaatgcccgt
ttgcttattgagcgaattgggaaaccacttgagttggatacagatggtatatggtgttgt
ctccctggatcttttcctgagaactttacttttaaaacaatagacatgaagaaactcacc
atctcgtatccttgtgttatgcttaatgttgatgtggcaaagaataatacaaatgatcaa
tatcagactcttgtagatcctgtacgcaagacatataaatcacatagtgaatgctcaatt
gaatttgaagtagatggaccgtacaaggcaatgattattcctgcatcgaaagaagaagga
atcttaatcaagaagcgttatgctgttttcaatcatgatggaaccttagcagaactcaag
gggtttgagatcaagcgtagaggggagctgaaactcattaaagttttccaggccgagctt
tttgacaaatttctccatggatcaactcttgaagagtgttattctgctgttgcagcggtt
gctgatcgatggcttgacctactcgataatcaaggaaaagatattgccgatagtgaactg
ctagattatatatcagaatcaagcacaatgagcaaatcgttagcagattatggtgagcaa
aagtcatgtgcagtgaccacagcaaaacgcctggctgaatttcttggtgttacaatggtc
aaagataaaggactacgttgccagtacattgttgcttgtgaaccaaagggtacaccggta
agcgaacgtgctgttcctgttgccatatttacaacaaatccggaagttatgaagtttcat
ttgcgaaaatggtgcaagacatcatcagatgtcggaattcgtctgattattgactggtcg
tattacaagcagcgccttagttcagctatccaaaaagttattaccattcctgctgcaatg
cagaaggtggcaaatcccgtgcctagggtgcttcatcctgactggctccataaaaaggtc
cgtgagaaagacgacaaatttcgccagagaaaactagttgatatgttcagctcagcaaat
aaagatgttgtgttggacacagatcttccggtgactaaagataatgtggaagatattgag
gatttttgcaaagaaaataggccttccgtcaaagggccaaagccaattgcgcgttcctat
gaagtcaataaaaaacagtctgaatgtgagcagcaagagagctgggatacagagttccat
gatatctcatttcagaacattgacaagagcgtaaactaccaaggatggcttgaactgaaa
aagagaaaatggaaagtaactctagagaagaagaaaaaacgaaggttgggtgatctaaga
tcttcaaaccaggttgatactcacgagataaatcaaaaagtcggtcagggaagaggaggt
gtgggttcatactttaggaggcctgaagaagctttgactagttcacattggcagataata
cagctggtcccaagtccacagagcggacaattttttgcttgggtggttgtggaagggttg
atgcttaagatcccattgtcgatcccaagggtgttttacattaattccaaagttcctata
gatgaatatttccaaggaaagtgtgtcaacaagattcttcctcatggaaggccttgttat
agtttgactgaggtcaagattcaagaagatcaatttaaaaaagaaagtaaaaagcgtgca
gctcttcttgcagaccctggagttgagggcatatatgaaactaaggtgcctctggagttt
agtgctatatgtcagattggatgtgtatgcaaaattgataacaaagccaagcaccgtaac
acccaagatggatgggaagttggtgaacttcacatgaaaactacaactgagtgtcactac
ttgaagcgttcaattccacttgtttacttgtataacagcacctcaacagggcgtgctata
tatgttttatattgtcatgtatcgaagcttatgtctgccgttgtagttgatccttttaac
ggcaatgaattattaccatctgccttagagagacagtttagagatagttgcctagaatta
tcacttgattcattgtcttgggatggtatccgtttccaggtgcactacgttgaccatccc
gaagctgccaagaagataatacaaagagcaataagtgaatacagagaagaaaattgtgga
ccaactgttgctgtcattgaatgccctgactttaccttcatgaaggaaggtattaaggcc
ctagatgatttcccatgtgtgaggattcccttcaacgacgatgacaatagttatcagcct
gtctcctggcaacgtccagctgcaaaaatagcaatgttccgttgtgctgcagcatttcag
tggttggatcggaggattacccaatcaagatacgcccatgtgcctctggggaattttgga
cttgattggctaacattcacaatagatatcttcctatccagggcactccgtgaccagcaa
caggtcctttgggtgtcagataatggtgttccagaccttggaggtataaacaatgaagag
gcattctttgccgatgaggtgcaacagacaagtttagtattccctggagcgtatagaaaa
gtgtctgtggagttaaagatccataacttggctgttaatgcccttctgaaaagcaacctg
gtgaatgaaatggaaggaggcggttttatgggatttgaacaggatgtgaatcctagagga
attaattcaaacgataacaccagttttgatgagaccactggatgtgctcaagcatttcgt
gtcctgaaacagttgattcatagttgcttgactgatgtgcgtaaatctaaaaatatatat
gctgattccattttgcaacgtttgtcttggtggctctgcagcccttcctcgaagctccat
gatccagctcttcatctcatgcttcacaaggtcatgcaaaaggtgtttgcactgctattg
actgatttgcggagattaggtgctataataatatatgcagacttctcaaaggtcattatc
gacacagtgaaatttgatctatctgcagctaaggcttattgtgaaagcttgctatcaacg
gtgcggaatagtgatatctttgagtggatattgctcgagccggttcactactggcactca
ttacttttcatggaccagtataactacgctggtatccgagccgatgatgaaatttcactt
gacgaagtgactattgaaccaaagtggagtgttgcacgacatttacctgagtatattgag
agggatttcattataatcattgccaagtttatatttgacccctggaaatttgcgatagaa
aataaaaagggcagttcagagagtttagaggcacagatgatagaatatctaagagaacag
attggatcaaccttcataaatatgcttgtcaaaaaggttgatgatatcatgtcacacatg
aaggagataaatgtttcagatgcatctcgggtttctggtcaagctcccaaaggagattac
tcgttggaatttatacaggttatctctgctgttctggctcttgaccaaaacgtccagcaa
gatgttctggtaatgagaaagagtctgttgaagtacattaaagtaaaagagtgtgctgct
gaagccgaatttcttgatcctgggccatccttcatcttacctaatgtagcttgcagcaac
tgtgatgcctacagagacctagatatatgcagagacccagcactgttaacagagaaagaa
tggtcatgtgcggatacacaatgtgggaagatatatgacagagagcagatggagagtagc
cttctagagatggtgagacagagagaaagaatgtaccatatgcaggatgtagtgtgcatt
aggtgcaatcaggtgaaagcggctcatttgacagagcagtgtgagtgttctggttccttt
agatgcaaggagagtgggtcagagttcagcaagaggatggagatattcatggatatagca
aagcgccagaagtttagactgttagaagaatacatctcttggatcatatatggccctagc
tattaa
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integrated database retrieval system
