Arabidopsis thaliana (thale cress): AT1G44910
Help
Entry
AT1G44910 CDS
T00041
Symbol
PRP40A
Name
(RefSeq) pre-mRNA-processing protein 40A
KO
K12821
pre-mRNA-processing factor 40
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT1G44910 (PRP40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT1G44910 (PRP40A)
Spliceosome [BR:
ath03041
]
Complex A
U1 snRNP components
U1 related factors
AT1G44910 (PRP40A)
Complex B
AT1G44910 (PRP40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
DUF5903
Motif
Other DBs
NCBI-GeneID:
841057
NCBI-ProteinID:
NP_175113
TAIR:
AT1G44910
UniProt:
B6EUA9
A0A7G2E0U4
LinkDB
All DBs
Position
1:16975604..16982965
Genome browser
AA seq
958 aa
AA seq
DB search
MANNPPQSSGTQFRPMVPGQQGQHFVPAASQPFHPYGHVPPNVQSQPPQYSQPIQQQQLF
PVRPGQPVHITSSSQAVSVPYIQTNKILTSGSTQPQPNAPPMTGFATSGPPFSSPYTFVP
SSYPQQQPTSLVQPNSQMHVAGVPPAANTWPVPVNQSTSLVSPVQQTGQQTPVAVSTDPG
NLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELMTPLERADASTVWKEFTTPEGK
KYYYNKVTKESKWTIPEDLKLAREQAQLASEKTSLSEAGSTPLSHHAASSSDLAVSTVTS
VVPSTSSALTGHSSSPIQAGLAVPVTRPPSVAPVTPTSGAISDTEATTIKGDNLSSRGAD
DSNDGATAQNNEAENKEMSVNGKANLSPAGDKANVEEPMVYATKQEAKAAFKSLLESVNV
HSDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEAEERRRRQKKAREEFVK
MLEECEELSSSLKWSKAMSLFENDQRFKAVDRPRDREDLFDNYIVELERKEREKAAEEHR
QYMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEKIDRLIGFEEYILDLEKEEEE
LKRVEKEHVRRAERKNRDAFRTLLEEHVAAGILTAKTYWLDYCIELKDLPQYQAVASNTS
GSTPKDLFEDVTEELEKQYHEDKSYVKDAMKSRKISMVSSWLFEDFKSAISEDLSTQQIS
DINLKLIYDDLVGRVKEKEEKEARKLQRLAEEFTNLLHTFKEITVASNWEDSKQLVEESQ
EYRSIGDESVSQGLFEEYITSLQEKAKEKERKRDEEKVRKEKERDEKEKRKDKDKERREK
EREREKEKGKERSKREESDGETAMDVSEGHKDEKRKGKDRDRKHRRRHHNNSDEDVSSDR
DDRDESKKSSRKHGNDRKKSRKHANSPESESENRHKRQKKESSRRSGNDELEDGEVGE
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataatcctccgcagtcttctggtacccagtttcggccgatggtacctggacag
cagggtcagcattttgttcctgcagcttcacaaccttttcacccttatggacatgtacct
ccaaatgttcaaagtcagcctccacagtattctcagccgatacagcagcagcagctcttt
ccagtgagaccaggtcagcctgtgcatattacatcatcctcacaggctgtatcagttccg
tatattcaaacgaacaagattctcacttctggatctactcaaccacagccaaatgcacct
ccaatgacgggctttgctacatctggacctccattttcttctccatatacttttgtacca
tcatcttatcctcagcaacaaccaacatccttggtccaaccaaattctcagatgcatgta
gctggcgtccctccagcagcaaacacttggcctgttcctgttaatcaaagcacatcactt
gtttcccctgtgcagcagactgggcaacaaacaccggtcgcagtttccacagacccagga
aacttgactccgcaatctgcatctgactggcaggagcatacatctgctgatgggagaaag
tattattataacaagcggacaaagcaatcaaattgggaaaaacctcttgaactgatgaca
ccacttgagagggctgatgcatccactgtatggaaggaatttacaacacctgaaggaaag
aaatattattataacaaggttacaaaggagtctaagtggacaattccggaagatttaaag
ttagctcgggaacaagcccaactagctagtgaaaaaacgtccctttcggaagctggatct
acccctctatcccaccatgctgcatcctcgtctgatctagcagttagcactgtgacttct
gttgttcccagcacatcttcagcacttactggacattcttcaagccctattcaagcgggt
ttggctgtacctgtcacccgtcctccctctgttgctcctgttactccaacatctggtgca
attagtgacactgaggctactacaataaaaggcgataatttatcatctcggggggcagat
gattcaaatgatggagctacagcacaaaacaatgaggctgagaataaggaaatgtctgtg
aatggaaaagccaatttgtcacctgctggtgacaaagcaaatgtcgaggaacctatggta
tatgctactaagcaggaggccaaagctgctttcaagtctcttttggaatctgtaaatgtt
cattccgactggacatgggaacagacattgaaagagattgttcacgataaaagatatggt
gctttgaggacactcggcgagcggaaacaagcgtttaacgagtatcttggccaaaggaaa
aaagtggaagctgaggaaagacgaaggaggcagaagaaagctcgggaagaatttgtcaag
atgctagaggagtgtgaagaactttcatcatccctgaaatggagcaaagcaatgagtttg
ttcgaaaatgatcagcgttttaaagctgttgaccgtcctagggatcgtgaagatcttttt
gacaattacattgtggaacttgagaggaaggaaagagaaaaggcagcggaggaacatcgg
cagtatatggcagactatcggaagtttcttgaaacctgtgactatatcaaagctggtaca
caatggcgcaaaattcaagatagactggaggatgatgacagatgctcatgtcttgaaaag
atagatcgtctgattggttttgaggaatacattcttgacctagagaaggaagaagaagag
ctgaagagagtagagaaagaacatgtaaggcgggccgagagaaaaaaccgtgatgcattt
cgtacactattggaagaacatgttgctgcaggcatccttacagccaagacgtactggttg
gattattgcattgagttaaaagacttgccccaataccaagctgttgcatctaatacatct
ggttcaactccgaaagacttgtttgaagatgtcacagaagaattagagaagcagtatcat
gaggataagagctatgtgaaggatgctatgaagtcaagaaagatttccatggtctcctcg
tggctgtttgaagattttaaatctgctatttcagaagatctcagtactcaacagatatca
gacataaatttaaagcttatatatgatgacttggttgggagagtgaaggaaaaagaagaa
aaagaggccagaaagcttcagcgtctggctgaagaatttaccaatctgttgcacactttc
aaggaaatcaccgtagcttcaaattgggaagatagcaaacaactagtagaagaaagtcaa
gagtacagatcgattggagatgaaagtgttagccaagggttatttgaggaatacataacg
agtttacaagaaaaggcaaaggagaaggagcgtaagcgtgacgaggaaaaggttagaaaa
gagaaggaaagggacgagaaagagaaacggaaagacaaggataaggagagaagggaaaag
gaaagagaacgtgaaaaagagaagggaaaagagaggagtaaacgggaagaatcagatggt
gagactgctatggatgtgagcgaaggtcataaagacgagaaaagaaagggaaaagatcgt
gacagaaaacatcgaagacggcatcacaacaattctgatgaagatgttagttctgatagg
gatgacagagatgagtcgaagaaatcatcccgtaaacatggtaatgatcgcaaaaaatca
agaaagcacgcaaactcgcctgaatcggagagtgaaaaccggcataaaagacagaaaaaa
gagagtagtcgccgaagtggtaatgacgagctagaggatggagaagttggggagtga
DBGET
integrated database retrieval system
