Arabidopsis thaliana (thale cress): AT3G24495
Help
Entry
AT3G24495 CDS
T00041
Symbol
MSH7
Name
(RefSeq) MUTS homolog 7
KO
K08737
DNA mismatch repair protein MSH6
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AT3G24495 (MSH7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT3G24495 (MSH7)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AT3G24495 (MSH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
822040
NCBI-ProteinID:
NP_850630
TAIR:
AT3G24495
UniProt:
Q9SMV7
LinkDB
All DBs
Position
3:complement(8912343..8918288)
Genome browser
AA seq
1109 aa
AA seq
DB search
MQRQRSILSFFQKPTAATTKGLVSGDAASGGGGSGGPRFNVKEGDAKGDASVRFAVSKSV
DEVRGTDTPPEKVPRRVLPSGFKPAESAGDASSLFSNIMHKFVKVDDRDCSGERSREDVV
PLNDSSLCMKANDVIPQFRSNNGKTQERNHAFSFSGRAELRSVEDIGVDGDVPGPETPGM
RPRASRLKRVLEDEMTFKEDKVPVLDSNKRLKMLQDPVCGEKKEVNEGTKFEWLESSRIR
DANRRRPDDPLYDRKTLHIPPDVFKKMSASQKQYWSVKSEYMDIVLFFKVGKFYELYELD
AELGHKELDWKMTMSGVGKCRQVGISESGIDEAVQKLLARGYKVGRIEQLETSDQAKARG
ANTIIPRKLVQVLTPSTASEGNIGPDAVHLLAIKEIKMELQKCSTVYGFAFVDCAALRFW
VGSISDDASCAALGALLMQVSPKEVLYDSKGLSREAQKALRKYTLTGSTAVQLAPVPQVM
GDTDAAGVRNIIESNGYFKGSSESWNCAVDGLNECDVALSALGELINHLSRLKLEDVLKH
GDIFPYQVYRGCLRIDGQTMVNLEIFNNSCDGGPSGTLYKYLDNCVSPTGKRLLRNWICH
PLKDVESINKRLDVVEEFTANSESMQITGQYLHKLPDLERLLGRIKSSVRSSASVLPALL
GKKVLKQRVKAFGQIVKGFRSGIDLLLALQKESNMMSLLYKLCKLPILVGKSGLELFLSQ
FEAAIDSDFPNYQNQDVTDENAETLTILIELFIERATQWSEVIHTISCLDVLRSFAIAAS
LSAGSMARPVIFPESEATDQNQKTKGPILKIQGLWHPFAVAADGQLPVPNDILLGEARRS
SGSIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCESCEISLVDTIFTRLGASD
RIMTGESTFLVECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYSVFRHLVEKVQC
RMLFATHYHPLTKEFASHPRVTSKHMACAFKSRSDYQPRGCDQDLVFLYRLTEGACPESY
GLQVALMAGIPNQVVETASGAAQAMKRSIGENFKSSELRSEFSSLHEDWLKSLVGISRVA
HNNAPIGEDDYDTLFCLWHEIKSSYCVPK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccagagatcgattttgtctttcttccaaaaacccacggcggcgactacgaag
ggtttggtttccggcgatgctgctagcggcgggggcggcagcggaggaccacgatttaat
gtgaaggaaggggatgctaaaggcgacgcttctgtacgttttgctgtttcgaaatctgtc
gatgaggttagaggaacggatactccaccggagaaggttccgcgtcgtgtcctgccgtct
ggatttaagccggctgaatccgccggtgatgcttcgtccctgttctccaatattatgcat
aagtttgtaaaagtcgatgatcgagattgttctggagagaggagccgagaagatgttgtt
ccgctgaatgattcatctctatgtatgaaggctaatgatgttattcctcaatttcgttcc
aataatggtaaaactcaagaaagaaaccatgcttttagtttcagtgggagagctgaactt
agatcagtagaagatataggagtagatggcgatgttcctggtccagaaacaccagggatg
cgtccacgtgcttctcgcttgaagcgagttctggaggatgaaatgacttttaaggaggat
aaggttcctgtattggactctaacaaaaggctgaaaatgctccaggatccggtttgtgga
gagaagaaagaagtaaacgaaggaaccaaatttgaatggcttgagtcttctcgaatcagg
gatgccaatagaagacgtcctgatgatcccctttacgatagaaagaccttacacatacca
cctgatgttttcaagaaaatgtctgcatcacaaaagcaatattggagtgttaagagtgaa
tatatggacattgtgcttttctttaaagtggggaaattttatgagctgtatgagctagat
gcggaattaggtcacaaggagcttgactggaagatgaccatgagtggtgtgggaaaatgc
agacaggttggtatctctgaaagtgggatagatgaggcagtgcaaaagctattagctcgt
ggatataaagttggacgaatcgagcagctagaaacatctgaccaagcaaaagccagaggt
gctaatactataattccaaggaagctagttcaggtattaactccatcaacagcaagcgag
ggaaacatcgggcctgatgccgtccatcttcttgctataaaagagatcaaaatggagcta
caaaagtgttcaactgtgtatggatttgcttttgttgactgtgctgccttgaggttttgg
gttgggtccatcagcgatgatgcatcatgtgctgctcttggagcgttattgatgcaggtt
tctccaaaggaagtgttatatgacagtaaagggctatcaagagaagcacaaaaggctcta
aggaaatatacgttgacagggtctacggcggtacagttggctccagtaccacaagtaatg
ggggatacagatgctgctggagttagaaatataatagaatctaacggatactttaaaggt
tcttctgaatcatggaactgtgctgttgatggtctaaatgaatgtgatgttgcccttagt
gctcttggagagctaattaatcatctgtctaggctaaagctagaagatgtacttaagcat
ggggatatttttccataccaagtttacaggggttgtctcagaattgatggccagacgatg
gtaaatcttgagatatttaacaatagctgtgatggtggtccttcagggaccttgtacaaa
tatcttgataactgtgttagtccaactggtaagcgactcttaaggaattggatctgccat
ccactcaaagatgtagaaagcatcaataaacggcttgatgtagttgaagaattcacggca
aactcagaaagtatgcaaatcactggccagtatctccacaaacttccagacttagaaaga
ctgctcggacgcatcaagtctagcgttcgatcatcagcctctgtgttgcctgctcttctg
gggaaaaaagtgctgaaacaacgagttaaagcatttgggcaaattgtgaaagggttcaga
agtggaattgatctgttgttggctctacagaaggaatcaaatatgatgagtttgctttat
aaactctgtaaacttcctatattagtaggaaaaagcgggctagagttatttctttctcaa
ttcgaagcagccatagatagcgactttccaaattatcagaaccaagatgtgacagatgaa
aacgctgaaactctcacaatacttatcgaactttttatcgaaagagcaactcaatggtct
gaggtcattcacaccataagctgcctagatgtcctgagatcttttgcaatcgcagcaagt
ctctctgctggaagcatggccaggcctgttatttttcccgaatcagaagctacagatcag
aatcagaaaacaaaagggccaatacttaaaatccaaggactatggcatccatttgcagtt
gcagccgatggtcaattgcctgttccgaatgatatactccttggcgaggctagaagaagc
agtggcagcattcatcctcggtcattgttactgacgggaccaaacatgggcggaaaatca
actcttcttcgtgcaacatgtctggccgttatctttgcccaacttggctgctacgtgccg
tgtgagtcttgcgaaatctccctcgtggatactatcttcacaaggcttggcgcatctgat
agaatcatgacaggagagagtacctttttggtagaatgcactgagacagcgtcagttctt
cagaatgcaactcaggattcactagtaatccttgacgaactgggcagaggaactagtact
ttcgatggatacgccattgcatactcggtttttcgtcacctggtagagaaagttcaatgt
cggatgctctttgcaacacattaccaccctctcaccaaggaattcgcgtctcacccacgt
gtcacctcgaaacacatggcttgcgcattcaaatcaagatctgattatcaaccacgtggt
tgtgatcaagacctagtgttcttgtaccgtttaaccgagggagcttgtcctgagagctac
ggacttcaagtggcactcatggctggaataccaaaccaagtggttgaaacagcatcaggt
gctgctcaagccatgaagagatcaattggggaaaacttcaagtcaagtgagctaagatct
gagttctcaagtctgcatgaagactggctcaagtcattggtgggtatttctcgagtcgcc
cacaacaatgcccccattggcgaagatgactacgacactttgttttgcttatggcatgag
atcaaatcctcttactgtgttcccaaataa
DBGET
integrated database retrieval system
