Amborella trichopoda: 18447531 Help Entry 18447531          CDS       T02990                                  Name (RefSeq) protein STABILIZED1   KO K12855   pre-mRNA-processing factor 6 Organism atr  Amborella trichopoda Pathway atr03040   Spliceosome Brite KEGG Orthology (KO) [BR:atr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     18447531  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:atr03041]     18447531 Spliceosome [BR:atr03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     18447531  Complex C    U5 SnRNP specific factors     18447531 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PRP1_N TPR_14 TPR_19 TPR_16 TPR_17 TPR_2 TPR_8 ubiquitin Suf TPR_1 PMC2NT Motif Other DBs NCBI-GeneID:  18447531 NCBI-ProteinID:  XP_006857690 UniProt:  U5DCL5 LinkDB All DBs Position Unknown AA seq 1032 aa AA seqDB search MVFVRLFDNRTLALDCPPHSTDLRTLKLVVEARVGIPASLQRFLFSTSMLLHQCPGEKKL SEMGILCDSTLMLHLPLMGGMQAPVVPKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIG PARAAPDLPDRAATTIGGAAIGPPGGIGRGRGRGAGGPEDEEDDEADEKGYDENQKFDEF EGNDVGLFASAEYDEDDKEADAVWESIDKRMDSRRKDRREARLKQEIEKYRASNPKITEQ FADLKRKLHTMSAQDWDSIPEIGDYSLRNKKKRFESFVPVPDTLLEKARQEKEHVTALEP KSMAAGGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSM KITSDAEISDIKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKIQAARHLIQKGCEECP KNEDVWLEACRLASPDEAKAVIARGVKSISNSVKLWMQAAKLEHDDANKSRVLRKGLEHI PDSVRLWKAVVELANEEDARLLLQRAVECCPLHVELWLALARLETYDQAKKVLNKAREKL SKEPTIWITAAKLEEANGNTAMVGKIIERAIRSLQREGVVIDREAWMKEAEAAERAGSVA TCQAIIKNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYGHALTVFLTKKSIWLKA AQLEKSHGTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPN SEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNVSEERRLLEE GLKLFPSFFKLWLMLGQLEERIGNLEKAKQVYESGLKHCPNPTSVPLWLSVANVEERMNG LSKARAVLTTARKRIPQNQHLWLAAIRAEARHGKKKEADVLLAKALQECPTSGILWAASI ELAPRPQRKSRSSEAVTRLTQDPYVTAEVAILFWQKRSIDKARTWFNRAVTHDPDIGDSW ALYYKFELQHGTEDSQKDVLDRCVSAEPRHGPRWTQVSKAIENSHQPIEAILKKVVVALG KDEGFVVPECKY NT seq 3099 nt NT seq  +upstreamnt  +downstreamnt atggtttttgtaagactttttgacaataggactttggccttggactgcccccctcattcc actgacctcagaaccctaaaactcgtggtggaagccagagtgggaatccctgcctcccta cagcgctttctcttctccacatcgatgctcctccatcaatgtccaggggagaagaagctt tcggaaatgggtattctttgtgattccaccctcatgcttcatcttcctcttatgggggga atgcaagctccagttgtccccaagccccggctcgaattccttaacacgaaacctccaccg aattacgtggctggtctcggtcgaggtgccactggcttcaccacccggtctgatattggc cctgcaagagctgcccctgaccttccggaccgcgcggccaccaccatcggtggggctgcc attgggccgccagggggcattggccgtggtcgagggaggggtgcaggtggccctgaggat gaagaagatgacgaggctgatgagaagggctacgacgagaaccagaagtttgacgagttc gaggggaatgatgttggcctttttgcatcagcggagtatgatgaggatgacaaggaggcg gatgcggtatgggagagcatcgacaagcgcatggattcgaggcggaaggaccggagggag gcgaggttgaagcaggagattgagaagtacagggcttccaaccccaaaatcactgagcaa tttgctgatttgaagaggaagctacatactatgtcggcgcaggattgggacagcatacca gagattggggactactctctgaggaacaagaagaagaggtttgagagcttcgtgccagtt cctgacactctgcttgagaaggctcgtcaagagaaagagcacgtcaccgccctcgaaccc aagagcatggcggccggtgggacagagaccccatgggcacagacccctgtgactgacctc acagcggtgggtgaaggaaggggcaccgttttgtcattgaagttggataggctatctgat tcagtgtcgggtttgacggtggtggatcccaaggggtacctgaccgacctcaagagcatg aagatcaccagtgatgctgagatttcagacatcaagaaggcgaggttgttgctgaaatct gtgacgcagactaatcccaagcacccccctggatggattgcagccgcaaggttggaggag gtcgctggcaagatccaggcagcgagacatctgattcagaaggggtgcgaggagtgtccc aagaatgaagatgtgtggctcgaggcatgtaggctggcgagtcctgatgaagccaaggcc gtgatcgcgaggggtgtcaagtcgatttccaactcggtgaagctgtggatgcaggcagca aaattggagcatgacgacgcgaacaagagtagggtgttgagaaaggggctcgagcacatt cccgattctgtgaggttgtggaaggcagtggtggaacttgctaacgaggaggatgcgcga ctgttgcttcagagagccgttgagtgttgtcctcttcatgttgagctgtggcttgcactt gcgaggcttgagacctatgaccaagcaaagaaggttctcaacaaggcgagggagaaactc tctaaagagccaaccatttggataacggccgcgaagcttgaggaggcgaatgggaatact gccatggtggggaagatcattgaaagggccatcagatctttgcaaagagaaggagtggtc attgacagggaggcttggatgaaggaggcagaggcagcggagcgtgccggttcagtagca acttgccaggctataattaagaacactatcggtatcggcgtggaggaagaagatcgcaag agaacttgggttgccgatgctgaggaatgcaagaagaggggctctattgagactgccaga gcaatctacggccatgcgcttactgtgttcttgacaaagaaaagcatatggctcaaggct gcacagctcgagaagagtcatgggaccagagagtccctcgatgccttgctgaggaaggct gtcacgtatagaccacaggccgaggtgctttggttgatgggtgcaaaggagaaatggctg gcgggtgatgtgcctgctgcccgagcgatcctgcaagaggcatatgctgcaattcctaac tcggaggagatctggcttgccgccttcaagcttgaattcgagaatcatgagcctgagaga gcgaggatgcttcttgccaaggcgcgagagaggggaggaaccgagagggtctggatgaag tcagcgatcgttgagagagagttggggaatgtttctgaggagaggaggttgttagaggag gggttaaaactcttcccatccttcttcaaattgtggctcatgcttgggcagctggaggaa cgcattggtaacctggagaaagccaagcaagtgtatgaatcgggtttgaagcactgccca aacccgacttctgttcccctgtggctctctgttgctaatgtggaggagcgtatgaatggg ctcagtaaagcaagggcagtccttacaactgctaggaagaggatccctcaaaaccaacat ctttggttggccgccattagagcagaagccaggcatgggaagaagaaggaagctgacgtc cttttggcaaaggcattgcaggagtgccccacgagtgggatcttgtgggcagcttccata gagctggctcctcgaccccagcgcaaatctcggagttcagaagctgtgacgcgattaact caggatccatacgtgactgcagaggtggccattctgttctggcagaaaagatcaattgac aaggcccggacttggtttaacagggcagtcacacatgaccctgatattggggattcttgg gccctatactacaagtttgagcttcagcatgggactgaggatagccagaaagatgtcctc gatcgatgcgtctctgctgagccgaggcatggaccgagatggacgcaggtttctaaggcc attgagaattctcatcagccaatcgaggctatcctaaaaaaggtggtagttgccttgggg aaagacgaaggatttgtggtccctgaatgtaaatattaa

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