KEGG   Agrobacterium fabrum: Atu0494
Entry
Atu0494           CDS       T00070                                 
Symbol
lhr
Name
(GenBank) large atp-dependant helicase-related protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
Organism
atu  Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:atu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atu03400]
    Atu0494 (lhr)
Enzymes [BR:atu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     Atu0494 (lhr)
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Atu0494 (lhr)
DNA repair and recombination proteins [BR:atu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Atu0494 (lhr)
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII PSD4
Other DBs
NCBI-ProteinID: AAK86307
UniProt: Q7D1C7
LinkDB
Position
circular:480100..482478
AA seq 792 aa
MLLIAPTGAGKTLGGFMASLTDLAERGKVPPGSGFVGVHTLYISPLKALAVDIERNLTRP
VSEMGLPIVIETRTGDTPQAKRQRQKVKPPDILLTTPEQVSLLLANKEAERFFRDLKYVV
LDELHSLVTSKRGHLLSLALARVRRHAPDVRFIGLSATVAEPMDLRRYLAPQGQGEPPAG
LITVEGGAKPDISILHTEERIPWSGHSARYAGKDLYEALKQHQTTLVFVNTRSQAERVFQ
ELWTVNDDNLPIALHHGSLDAGQRRRVEAAMAENKLRAVVATSTLDLGIDWGDVDLVVHV
GAPKGASRLAQRIGRSNHRMDEPSKAILVPANRFEVMECRAALDANYIGAQDTPPIAEGA
LDVLAQHVLGMACAEPFDADELYREVTSASPYANLPRATFDRVVDFTATGGYALRTYERY
ARIRQMKDGRWRVSNPAVAQQYRLNLGTIVEAAELNVRMVKRNAKGTVGRGGMSLGKVEE
YFLEQLVQGDTFLFAGKVLRFEGIRENECLVSQAFSMDPKIPSYAGGKFPLSTYLADQVR
SMLADPARWQALPDQVRDWLEIQKEKSIIPKRDELLVETFPFRKRFFMVMYPFEGRLAHQ
TLGMLLTRRLERAGAKPMGFVATDYSLAIWAMEDIGMRLKSRRLSLADLLDEDMLGDDLE
AWLDESFMLKRTFRNCAVISGLIERRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILLEA
TRRDAAAGLLDIGRLGDMLKRIKGHTTHRALEHVSPLAVPVMLEIGRETVAGEAMDDVLA
EAADELIAEAMS
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgctgttgatcgcgccaacgggcgccggcaagacgctcggcggtttcatggcgtcgctc
accgatctggcggagcgcggcaaggtgccgcccggctccggttttgtcggcgtgcacacg
ctctatatctcgcctctgaaggcgcttgcagtggatatcgagcgcaatctcacgagaccc
gtttccgaaatgggcctgccgattgtgatcgaaacccgcacgggcgatacgccgcaggcc
aaacgccagcgccagaaggtgaagccacccgatatactgctgacaacaccggagcaggtc
tcgctgctgcttgccaataaggaagccgagcgctttttccgcgatctgaaatatgtggtt
cttgacgaactgcattccctcgtcacttccaaacgcggccacctgctgtcgctggcgctc
gcacgggtgcgtcggcacgctcctgacgtgcgcttcatcggcctttcggccacggtggcg
gagccgatggatctgcgtcgttaccttgcgccacaggggcaaggtgagccgccggccggc
ctcatcacggtggagggtggagcaaaaccggacatttccattttgcacacggaagaacgc
attccatggtctggccactccgcgcgttatgccggcaaggacttatacgaggcgttgaag
cagcatcagacgacactggtcttcgtcaacacgcgctcacaggccgaacgggtcttccag
gaactgtggaccgtcaatgacgacaatctgccgattgcgctgcatcacggctcgctggat
gccggccagcgccgcagggtggaggcggccatggcggagaacaagttgcgcgccgtcgtt
gccacctcgacgcttgatctcggcatagactggggcgatgtcgacctcgtcgtgcatgtc
ggcgcgcctaaaggggctagccgccttgcccagcgcatcggccgttccaatcaccgcatg
gacgagccgtcaaaggcgatcctcgttcccgccaaccgtttcgaggtgatggagtgccgg
gcagcgctggatgccaattacatcggcgcgcaggataccccgcctatcgccgaaggcgcg
ctagatgttctcgcccagcatgtgctcggtatggcctgcgccgaacccttcgatgcggat
gaactttatcgcgaagtcaccagcgcctcgccctatgccaacctgccgcgcgctaccttc
gaccgggtggtggatttcaccgcgacaggcggttacgcgctacgcacctatgagcgttat
gcccgcatccgccagatgaaggatggccgctggcgcgtttccaatccggctgtcgcccag
caatatcgcctgaacctcggcaccatcgtcgaggcggcggaactcaatgtccgcatggtc
aagcgcaatgccaagggcacggtcggacgcggcggcatgtcgctcggcaaggtcgaggaa
tatttcttggagcaactggtgcagggcgatacattcctgttcgccggcaaggttctgcgc
ttcgaaggcatccgcgagaatgaatgcctggtgtcgcaagccttttccatggacccgaaa
ataccctcctatgctggcggcaagtttccgctttccacctatttggcggatcaggtgcgc
tccatgcttgccgatcccgcccgctggcaggcgctgccggatcaggtccgcgactggctg
gaaatccagaaggaaaagtcgatcattcccaagcgcgacgagttgctcgtcgagaccttc
ccgttccgcaaacgcttcttcatggtcatgtatcccttcgagggacggctggcgcaccag
acgctcggcatgcttctgacgcggcggctggagcgcgcgggcgcaaaaccgatgggtttc
gtcgccaccgattactcgctcgccatatgggccatggaggatatcggcatgcggctgaaa
tcccgccgcctgtcgctggcggaccttctcgacgaggacatgctgggcgacgatctggag
gcgtggctggatgagtccttcatgctgaaacgcacgtttcgcaattgcgccgtcatctct
ggcctcatcgaacgtcgccatccgggcaaggaaaagaccggccggcaggtcacggtctca
gccgatcttatttatgacgttcttcgcagccatgagccggatcatatcctgctggaagcg
acgcggcgggatgcggcggcgggacttttggacattggccgtcttggcgatatgctgaag
cgaatcaagggccacaccacccatcgcgcgctggagcatgtctcgccgcttgccgttccg
gtgatgctggaaatcggccgcgagacggtggcaggtgaagcgatggacgatgtgctggcc
gaagccgccgacgagctgatcgcggaagccatgtcctga

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