KEGG   Aureimonas sp. AU20: M673_09030Help
Entry
M673_09030        CDS       T04161                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
aua  Aureimonas sp. AU20
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:aua00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    M673_09030
   03410 Base excision repair
    M673_09030
   03420 Nucleotide excision repair
    M673_09030
   03430 Mismatch repair
    M673_09030
Enzymes [BR:aua01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     M673_09030
    6.5.1.6  DNA ligase (ATP or NAD+)
     M673_09030
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     M673_09030
DNA replication proteins [BR:aua03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    M673_09030
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     M673_09030
DNA repair and recombination proteins [BR:aua03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     M673_09030
   NER (nucleotide excision repair)
    Other NER factors
     M673_09030
   MMR (mismatch exicision repair)
    Other MMR factors
     M673_09030
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2000676..2002337
Genome map
AA seq 553 aa AA seqDB search
MQRFAELLDRLVRTPSRNGKLKLMVDYFRVVPDPERGTALAALTGELDIRSVKPAMLREL
MASRMDEVLFGYSYDYVGDLAETIALVWPSPHDGEARGRNDIPSLSEVVTVLDAATRAEG
PKLVEDWLDRLDSSGRYALLKLVTGSLRIGVSSRLAKQALADFGAKEIAEIEELWHGLRA
PYADLFAWLEGEVDKPVSAAAAPFRPVMLSQPLEEPDYGRIDPLTYAAEWKWDGIRVQAT
VERGVRRLYSRTGDDISGAFPDLLDFMTYDGSLDGELLVARPADRGGAPRVEPHEDAVRD
DIVVGTFSDLQQRLNRKTVSAAVLKKHPVFLRTYDLLQDGAEDLRSLPFAERRQRLNRFV
AALEQTRFDISPFVAFDDFEALAGLRASPPHPVIEGLMLKRWDSAYVPGRPKGPWFKWKQ
DPHLIDAVLMYAQRGHGKRSSFYSDYTFGVWTGPEDQPELVPVGKAYFGFTDEELKQLDK
YIRDNTISRFGPVRSVRAEPDHGLVLEVAFEGLARSTRHKSGVAMRFPRVSRLRWDKPAF
EADRLETLQAMLA
NT seq 1662 nt NT seq  +upstreamnt  +downstreamnt
ttgcagcgctttgccgaacttctcgaccgcctcgttcgcacgccgtcgcgcaacggcaag
ctgaagctgatggtggactatttccgggtcgtgcccgaccctgagcggggcacggcgctg
gcagcgctgacgggcgaactcgacatccggtcggtgaagccggccatgctgcgcgaactc
atggccagtcggatggacgaagtcctgttcggctattcctacgattatgtcggcgatctc
gccgagactatcgcgctcgtctggccctcgccgcatgacggcgaggcgagggggcgcaat
gacattcccagcctctctgaggtggtaacagtgctggatgcggcgacgcgcgcggaaggg
ccgaagctggtggaggactggctcgaccggctggattcctcgggccgctacgcgctcttg
aaactcgtcaccggctcgctgcgcatcggcgtctcgtcccgcctcgccaagcaggccctg
gccgatttcggcgccaaggagatcgccgagatcgaggagctctggcacgggctgcgcgcg
ccctacgcggatcttttcgcctggttggaaggcgaggtcgataagccggtctcggccgcc
gccgcgccgtttcggcccgttatgctgtcgcagccgctggaagagccggactacggccgg
atcgaccccttgacctacgccgccgaatggaagtgggacggcatccgcgttcaggcgacc
gtcgagcgcggggtgcgccggctttattctcggaccggcgacgacatttccggcgccttt
cccgatcttctcgacttcatgacctatgatggctcgctcgacggggagcttctggtggcc
cgcccggccgatcgagggggcgcgccgagggttgagccgcacgaggacgcggtgcgggac
gacattgtggtcggcaccttctcggacctacagcagcggctcaaccgcaagaccgtctcg
gccgcggtgctgaagaagcatcccgtcttcttgcggacctacgacctcctgcaggatggc
gcggaggatttgcgcagcctgcctttcgcggagcggcgccagcggttgaaccggttcgtg
gcggcgctggagcagacgcgcttcgacatctcgccgttcgtcgccttcgacgatttcgag
gcgctggcggggcttcgcgcttcgccgccccatcccgtgatcgaaggcctgatgctgaag
cgctgggactcggcctatgtgccgggccggcccaagggcccctggttcaagtggaagcag
gacccgcatcttatcgacgcggtgctgatgtatgcccagcgcggccacggaaagcgctcc
agcttctattccgactacacgttcggcgtctggaccgggccggaggaccagccggagctg
gtgccggtgggcaaggcctatttcgggttcaccgacgaggagttgaagcagctcgacaaa
tatatccgcgacaacacgatcagccgcttcggcccggtgcgctccgtacgcgccgagccc
gaccatgggcttgtgctggaggtcgccttcgaaggactggcgcgctcgacacgccacaag
tcgggcgttgccatgcgctttccccgcgtgtcccgcctgcgctgggacaagccggccttc
gaggcggaccggctggagacgttgcaggccatgctggcctga

DBGET integrated database retrieval system