Trichormus variabilis: Ava_2236
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Entry
Ava_2236 CDS
T00277
Name
(GenBank) DNA replication and repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ava03400
]
Ava_2236
DNA repair and recombination proteins [BR:
ava03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ava_2236
TLS (translesion DNA synthesis) factors
Other SOS response factors
Ava_2236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_29
AAA_15
DUF4201
ATG16
AAA_22
AAA_16
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ABA21854
CyanoBase:
Ava_2236
UniProt:
Q3MAY2
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Position
2780403..2782151
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AA seq
582 aa
AA seq
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MLLCLRIENFALIDQLELDFGAGLNVLTGETGAGKSIILDAIDAVLGGKVSSRVIRTGTS
RAMVEATFTTNPPLAAWLTEQEIDLIDDNSVVISREITVSTSNIRSRSRVNGVLVNRQLM
GGLRDRLVEITAQGQTVQVGQSAQVRDWLDMYGGDALIQQRQHIATAFSAYQQAHTNLEK
RRTSERERLQQLDLLTYQVQELSTANLSDPQELEQLQQERERLNHVVDLQQMSYKIYQAL
YQTEDETLAVSDLLGDSEATLNDMVEYDGQLQPLLDLVRDAQTAITEVARQINTYGESLE
ADPQRLEEVEERIRELKQICRKYGPSLTEAIAYSEKIQAELAALNDSEQSIESLEQQEKV
CFEKLTQSCQKLTQLRKKTGATLESRLIAELKPLAMEKVKFQVEILPIVPTSAGADKITF
MFSPNPGEPLQPLTEIASGGEMSRFLLALKACFNQADAAATLVFDEIDVGVSGRVAQAIA
EKLHQLSQSHQVLCVTHQPLVAAMADKHFRVDKQTVTQGKGKKSNNGNSEQRTVVRVTNL
DDLTTRREELAQLAGGKSASDAIAFAESLLTQAANHRQGQRS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgttgctttgcctgcggattgaaaattttgccctgattgatcaactggaactggatttc
ggcgctggtctgaatgttttaacaggtgaaaccggcgcgggaaaatcaattattttagat
gcaattgatgctgtgttaggtgggaaagtttctagtcgggtgattcggactggaacatct
agggcaatggtggaagccactttcaccacaaatccccccttagcagcttggttgacagaa
caagaaatagatttaattgacgataattctgtggtcattagtcgagagatcaccgttagt
actagtaatatccgcagccgatcgcgggtgaatggtgtgttagtcaatcgccaacttatg
ggcggactgcgcgatcgcttggtggaaattacagcccaaggtcaaacagtacaagtaggg
caatcagcccaagtccgggactggttggatatgtacggtggtgatgctttaattcagcag
cgtcaacacatcgccacagcctttagtgcttatcagcaagcccatacaaatttagaaaag
cgccggacatcggaacgggaacgactgcaacaactggacttattaacctatcaagtccaa
gagttatcaacagccaatctcagcgatccccaggaattggaacaactgcaacaagaacgg
gaacgcctgaatcatgttgttgatttacaacagatgagttacaaaatctatcaggctttg
tatcaaaccgaagatgaaaccctagccgtctcagacctccttggcgacagcgaagccacc
ttaaacgatatggtggaatatgacgggcagttacaaccattgttagatttggtcagggat
gctcaaacagccattacagaagtagccagacaaattaatacttatggggaaagtttggaa
gcagacccccagcgcttagaagaagtagaagaacggattcgagagttaaaacaaatctgc
cgcaagtatggccccagcttaacagaagcgatcgcctacagcgaaaaaattcaagctgaa
ttggcagccctcaacgatagcgaacaatccatcgaaagtttagaacagcaggaaaaagtc
tgttttgagaaactaactcagtcctgccaaaagttaactcagttacgcaagaaaacaggc
gctaccttagaatctcggttgatagccgaacttaaacccttggcaatggaaaaagtcaag
tttcaagtagaaatattgccaattgtgccaacatctgctggtgcagacaaaattaccttt
atgtttagccccaacccaggggaaccactacaaccattaacagaaattgcttctggtggg
gaaatgagccgcttcttactagccctgaaagcttgttttaatcaagctgatgcagcagca
acattagtatttgatgaaatagacgttggggtttcggggagagtagcacaggcgatcgcc
gaaaaattacatcagttgagtcaaagccaccaagtattatgtgttactcaccaaccctta
gtagcagcaatggcagataagcatttccgcgtagataagcagactgttacccagggtaag
ggtaaaaaatctaacaatggtaatagtgaacagcgtactgtggtacgtgtaacaaactta
gatgatttgactacccgcagggaagaattagcccagttagctggtggaaaatccgccagt
gatgcgatcgcctttgcagaaagtttgttaacccaagcggctaatcaccgtcagggacag
aggagttga
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