Trichormus variabilis: Ava_4936
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Entry
Ava_4936 CDS
T00277
Name
(GenBank) leucyl-tRNA synthetase
KO
K01869
leucyl-tRNA synthetase [EC:
6.1.1.4
]
Organism
ava
Trichormus variabilis
Pathway
ava00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ava_4936
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ava01007
]
Ava_4936
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ava03016
]
Ava_4936
03029 Mitochondrial biogenesis [BR:
ava03029
]
Ava_4936
Enzymes [BR:
ava01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.4 leucine---tRNA ligase
Ava_4936
Amino acid related enzymes [BR:
ava01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Ava_4936
Transfer RNA biogenesis [BR:
ava03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Ava_4936
Prokaryotic type
Ava_4936
Mitochondrial biogenesis [BR:
ava03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Ava_4936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1_2
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1e
tRNA-synt_1f
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
ABA24533
CyanoBase:
Ava_4936
UniProt:
Q3M3A3
LinkDB
All DBs
Position
6205668..6208286
Genome browser
AA seq
872 aa
AA seq
DB search
MDSRYNPAILEEKWQKTWVELGLDKTQTQSNKPKFYALSMFPYPSGSLHMGHVRNYTITD
VIARLKRMQGYRVLHPMGWDAFGLPAENAAIDRGVPPANWTYQNITQMRQQLQRLGLSID
WDSEVATCSPDYYKWTQWIFLQFLQAGLAYQKEAAVNWDPIDQTVLANEQVDNEGRSWRS
GAIVERKLLRQWFLKITDYAEELLNDLDKLTGWPERVKLMQANWIGKSVGAYLEFPIVGS
TEKIAVYTTRPDTVYGVSYVVLAPEHPLTKQVTSKTQQAVVDTFIQEVTNQSELERTAED
KPKRGVATGGKAINPFTGEEVPIWIADYVLYEYGTGAVMGVPAHDVRDFKFAQRYDLPID
FVIAAPDDVAGFDLSPTSETEEVTQVVQIEYNQAYTEPGILINSGAFTGMTSTDAKQAIV
KYATEKGFGKERIQYRLRDWLISRQRYWGAPIPVIHCPNCGIVPVPDKDLPVILPEEVEF
TGRGGSPLAQLESWVNVPCPTCGSPAKRETDTMDTFIDSSWYFLRFTDARNEAQVFESAK
TNDWMPVDQYVGGIEHAILHLLYSRFFTKVLRDRGLLNFDEPFERLLTQGMVQGLTYFNP
NKGGKDKWVPSHLVNPNDPRDPQTGEPLQRLYATMSKSKGNGVAPEDVIAKYGVDTARMF
ILFKAPPEKDLEWDEADVEGQFRFLNRVWRLVTDYVASGVNPKNKSGELSKSEKDLRRAI
HSAIQSVTEDLEDEYQFNTAISELMKLSNALTDANGKDSRVYAEGIHTLVVLLAPFAPHI
AEELWQLLGNSESVHTQTWPAFDPAALVADEITLVIQVNGKKRADIQVPSQADKAELEKY
ARESEVVQRHLEGKEIKKVIVVPGKLVNFVVG
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
gtggactcccgatacaaccccgcaatacttgaggaaaaatggcaaaaaacatgggtagaa
cttggtttagataagacccaaacacaaagcaataaaccaaaattctacgctctatccatg
tttccctatccatcgggcagcctacacatgggtcacgtccgtaattacacaattacagat
gtgattgcccgcctcaaacgaatgcaagggtatcgggtactgcatccaatgggatgggat
gcctttggcttaccagcagaaaacgccgccattgaccgtggtgtacctcctgccaactgg
acttatcaaaacattacccaaatgcggcaacaattgcagcgtcttggtttatctattgac
tgggatagcgaagttgccacctgttcgccagactattacaaatggacacagtggattttc
ttacagttcttgcaagcggggttagcttaccaaaaagaagcagccgtcaactgggacccc
attgaccaaaccgtattggcaaacgagcaggttgataacgaaggtcgttcttggcgcagt
ggcgcgatcgttgagcgtaaattgctcaggcagtggtttttaaagattaccgactacgct
gaagaattattaaacgacttagataaattgaccggttggccagaacgcgtcaaattgatg
caggcgaactggatagggaaatctgtaggcgcatatttagaatttcccattgtcggcagc
actgagaaaattgctgtgtataccacccggcctgatacagtttacggtgttagctatgta
gtattggcaccagaacaccccctcaccaaacaagtcaccagcaaaactcaacaagcagta
gtagacacctttattcaagaggtgacaaatcaaagcgagttggaacgtaccgccgaagat
aaacctaaacgcggtgtagcaaccggcggtaaggcaatcaacccgtttacaggggaagaa
gtacccatttggattgccgactatgtactgtacgagtatggtactggggctgtgatgggt
gtacctgcccatgatgtacgggattttaaatttgctcagagatatgatttacccattgat
tttgtcattgcagcccctgatgatgtagcaggttttgacttaagcccgacatcagagaca
gaagaagtcacacaagtcgtgcaaatagaatataaccaagcatacacagagccaggaatc
ttaattaattccggggcttttactggtatgacttccacagatgccaagcaagcgattgtg
aaatatgccacagaaaaaggttttggcaaagaacgtattcaatatcgcttgcgggactgg
ttgatttctcggcaacgttattggggcgcaccaattcctgtaattcattgtcccaactgt
gggatagtaccagtgccagacaaagatttgccagttatcttaccagaagaagtggaattt
actggacgtggtggttcaccgttggcacagttggaaagctgggtaaatgtgccttgtcct
acctgtggtagtcctgccaaacgggaaactgacacgatggatacctttattgattcctcg
tggtatttcttgcggtttactgatgctaggaacgaagcacaggtatttgaatcagcaaaa
accaatgactggatgcccgtagaccaatatgtaggcggtattgaacacgcgattttacac
ttattgtattcccggttttttactaaagtgctgcgcgatcgcggcttgttgaactttgat
gaaccttttgaacgtttgttaactcaagggatggtacaaggtttaacttacttcaatccg
aacaagggggggaaagataagtgggttccttcccatttagttaaccccaatgaccctcgt
gacccccaaacaggtgaaccattgcaacggctttatgccaccatgtccaaatctaaaggc
aacggtgtcgcaccagaagatgtgattgctaaatatggtgtagacacagcacggatgttc
atcttatttaaagcgccgccagaaaaagatttggaatgggatgaagctgatgtagaagga
caattccgctttttaaatcgggtttggcgtttggtgacagattatgttgcatctggggtc
aaccctaaaaataaatctggtgaattgagcaagtcagaaaaagatttacggcgggcaatt
cacagtgcaattcagtcggtgacagaagatttagaggatgagtatcagtttaatactgct
atttctgagttgatgaagttaagcaatgcccttactgatgctaacggcaaagattcacgg
gtctatgctgaaggtatccacacattagtggtgttgctggctccctttgcgccacatatt
gctgaagaattgtggcaactattgggtaatagcgaatcagtgcatacgcaaacctggcct
gcttttgacccagccgctttagttgccgatgaaatcactttggtgattcaagtgaatggt
aagaagcgtgctgatattcaagttccgtcacaagctgataaagctgagttggagaaatac
gcccgcgaatcagaagttgtgcagcgtcacctggaaggtaaggaaattaaaaaggtaatt
gtcgtacctggaaagttagttaattttgtcgttggttaa
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