Trichormus variabilis: Ava_B0235
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Entry
Ava_B0235 CDS
T00277
Name
(GenBank) Secretion protein HlyD
Organism
ava
Trichormus variabilis
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Gene cluster
GFIT
Motif
Pfam:
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
ABA24946
CyanoBase:
Ava_B0235
UniProt:
Q3M240
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Position
A:complement(262414..263916)
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AA seq
500 aa
AA seq
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MVELKNFSPNFLPSAKSDEYLPQIGIWTRLGGFFLVGVVGMAVSVAALTRYHQTVKAPGT
VRPTGELRIVQTAIAGTVKKTFVRENQLVNQGESLVILDDTQLQTKKSQLQGNIQKSQQQ
LHQINAQILALDQQITTENQRGERVISSAKAELNLTQREYADKQIAVSSEWQEAEANLKI
AQNELQRSQADLKSIQANLKSAEAAYQAAIVKHDRYQIIAQSGSISQNQLEEVQLAATQQ
AQVLESQKAAVESQKQVIQQKQQALTAAVANRVKASSALNPSDAVMTIAQEKIATEQASK
QNNLARLRQEKESLLQRQTEIQDTINNTKKELKQILADIQKTIIRASATGNIFKLELRNP
GQVVELGQAIAQIAPNNKPLIIKARVASADIGKVQICRLEKIADCQQGKVNIQFSAYPYP
DYGTLKGAVREITADAITTANNSSIPAYYDATIEPEVNYLQKNSQKYHVQAGMEVTTDIL
AQEETLLTFILRKTRLLTNL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtagaactcaaaaattttagtcctaattttcttcctagtgcaaaatccgatgaatac
ctacctcaaattggtatttggacgcgactaggaggattttttcttgtgggtgtggtgggt
atggctgtgagtgtcgcagctttgacaagatatcatcaaacagtgaaagcacctggaact
gtgcgtccgactggagaattacgtatagttcaaacagcaatagcaggaacggtgaaaaaa
acttttgtcagagaaaatcagttggttaaccaaggtgaatctttagtaattcttgatgat
actcaactacaaactaaaaaaagtcaactacaaggaaatattcaaaaatctcagcaacaa
cttcaccaaataaatgctcaaattctcgctttagatcagcaaattaccacagaaaatcag
cgtggtgaacgtgtgatttcctcagctaaggctgaactcaacttgacacaaagagagtat
gcagataaacaaattgcggtgagtagtgaatggcaagaagctgaggctaatctgaaaatt
gctcaaaatgaattgcagcgatcgcaagctgatttaaaatccattcaagctaatctcaaa
agtgcagaggctgcatatcaagcggcaattgtcaagcacgatcgctatcaaattatcgcc
caatctggctctatttcccaaaaccaactagaagaagtacaactagcagcaacacaacaa
gcacaagttttagaatcccaaaaagccgccgtagaaagtcaaaaacaagtcattcagcaa
aaacagcaagctttaacagccgcagtagccaaccgggtgaaagcctcctcagcattaaac
cccagtgatgcagtgatgacaattgctcaagaaaaaattgccactgaacaggctagtaaa
caaaataatttagctcgtttacgccaagaaaaagagagtttattacagcgtcaaacggaa
attcaagacacaattaataatacaaaaaaagaactgaaacagattttagctgatattcaa
aaaactatcattcgggcttcagctacaggcaatatttttaagttagaattgcgaaacccc
ggacaagttgtagaattgggacaggcgatcgctcagatcgcccccaacaataagccttta
atcattaaagcccgtgtagcatctgctgacattggtaaagtacagatttgtcgattagaa
aaaattgcagattgtcaacaaggtaaagtaaatatccaattttctgcttatccctatcct
gattacggcacacttaaaggtgcagtgagagaaattactgccgatgcaattactacagca
aataactcatcaatacctgcctattatgatgcgacaattgaaccagaagtaaattactta
caaaaaaattcgcaaaagtatcatgttcaagcaggtatggaagtcacaacagacatccta
gctcaagaagaaactctgttaacattcatactcaggaaaactagattactgactaattta
tag
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