Trichormus variabilis: Ava_C0115
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Entry
Ava_C0115 CDS
T00277
Name
(GenBank) transcriptional regulator, AraC family
Organism
ava
Trichormus variabilis
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Gene cluster
GFIT
Motif
Pfam:
AraC_N
HTH_18
HTH_AraC
TetR_N
HTH_10
CEP63
CHRDL_1_2_C
AraC_binding
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ABA25203
CyanoBase:
Ava_C0115
UniProt:
Q3M1E0
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Position
C:137160..138080
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AA seq
306 aa
AA seq
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MTVAISRPDIIADHRQEIATRIVRHTKSSGNIIQPTAIEQLDFARSDTVSTAPHSVYEPI
LAIVVQGQKKAFLGEETYQYGAMQYLVVSVDLPLSGFVTEATPDKPYLGLKLNLDLMQLC
EMVAQMGSSSAKPEKSIRGISVSNVDPALMECALRLVKLLDTPQHISMLAPLMIRELYYH
LLLGEQGEAVRQIATSGSNMQRIALAIQQIKSDFTKPMRIEDLASQIGMSTSSFHQHFKQ
VTSMSPLQYQKQLRLLEARRLMLAEDFDATSTAYQVGYESPSQFSREYSRLFGAPPIRDI
ERLRTA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcgcaatctctcgccctgacataattgcggatcaccgccaagaaatcgccaca
cggatcgtgcggcataccaaatccagcggcaacattatccaacccacggcgatcgagcaa
ttagactttgcgcgctcagatacagtatctaccgcacctcatagcgtgtatgaacccatc
ctggcgatcgtcgttcaaggtcagaaaaaagcatttctgggtgaggagacatatcagtat
ggtgcaatgcagtatctcgtcgtttccgttgatttaccgctgagtggctttgtgactgag
gcgacacctgacaagccgtatttagggctgaagctgaacttagacttgatgcaattgtgt
gagatggttgcccaaatgggttccagttcggcaaagccagaaaaatctattcgaggtata
tcggttagcaacgtcgatccagcgttgatggagtgtgcccttcgcctcgtcaagctctta
gacactccgcaacacatctctatgctggcaccgttaatgattcgtgaactctattaccat
ctgctgttgggtgaacaaggggaagccgtgcgtcaaattgccacatccggcagtaatatg
cagcgaattgctttagcaattcaacaaatcaaatctgattttaccaagccgatgcggatc
gaggatttagcgagtcagatcgggatgtctacttcgtcgttccatcagcatttcaagcaa
gtcacttcgatgagtccgcttcagtatcagaagcagttaagactattagaagcgcgtcgt
ctgatgttagctgaggatttcgatgcgacctctactgcctaccaggtgggatatgaaagt
ccctcacagttcagtcgggaatattcgcgcttgttcggtgcgccgcccattcgagacatt
gaacggttacggacagcttga
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