KEGG   Allorhizobium ampelinum: Avi_5992
Entry
Avi_5992          CDS       T00851                                 
Name
(GenBank) ECF family sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
avi  Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:avi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:avi03021]
    Avi_5992
Transcription machinery [BR:avi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Avi_5992
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF DUF134 HTH_23
Other DBs
NCBI-ProteinID: ACM39013
UniProt: B9K2B5
LinkDB
Position
2:complement(999342..999908)
AA seq 188 aa
MTLEKQSDDRGFKRDMLAALPNLRAFAVSLAGRHHVADDLVQDTIMKAWAKQDHFEPGTN
MKAWLFTILRNEFYSQMRKRGREVSDPDGIFTSQLAVHPQQYGSLDLQDFKKALDQLPSD
QREAIILVGASGFAYEEAAEICGCAVGTIKSRINRARNRLQEILGVSGEGDFGPDAHDAA
VTKRAFAV
NT seq 567 nt   +upstreamnt  +downstreamnt
atgacccttgaaaagcaatcggatgatcgcggcttcaagagagatatgctggctgccctg
cccaatctacgtgcgtttgccgtctcgcttgccggacgccatcacgtcgcggatgatctt
gtccaggatacgatcatgaaagcctgggcaaagcaggatcatttcgaaccaggcaccaat
atgaaagcctggttgttcaccattctgcgcaatgaattctattcgcaaatgcgcaagcgc
ggccgcgaggtctcggacccagacggcattttcacctcacagctggctgttcatcctcag
caatacggttcgctcgaccttcaggacttcaaaaaggcgctcgatcaactgccgagcgac
cagcgcgaagccattattctggtcggtgcctccggtttcgcctatgaggaagcggcggaa
atttgcggttgcgccgtcggcaccatcaagagccggatcaaccgggcgcgaaaccgcctg
caggagattcttggtgtgagcggagaaggtgatttcggacccgacgcccatgacgctgcg
gtaacgaaacgcgcattcgcggtataa

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