Azotobacter vinelandii DJ: Avin_00200
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Entry
Avin_00200 CDS
T00885
Symbol
yrdC
Name
(GenBank) RNA binding yrdC protein
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
avn
Azotobacter vinelandii DJ
Brite
KEGG Orthology (KO) [BR:
avn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avn03009
]
Avin_00200 (yrdC)
03016 Transfer RNA biogenesis [BR:
avn03016
]
Avin_00200 (yrdC)
Enzymes [BR:
avn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
Avin_00200 (yrdC)
Ribosome biogenesis [BR:
avn03009
]
Prokaryotic type
Other maturation factors
Avin_00200 (yrdC)
Transfer RNA biogenesis [BR:
avn03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Avin_00200 (yrdC)
Prokaryotic type
Avin_00200 (yrdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
ACO76288
UniProt:
C1DFW1
LinkDB
All DBs
Position
22722..23279
Genome browser
AA seq
185 aa
AA seq
DB search
MLGDWRVRQVARAVRRGGVIAYPTEAVWGLGCDPWNADAVRRLLALKRRPQDKGLILVAA
DIGQFGFLLDDLPSAWRERLAGTWPGPNTWLVPHRGRLPAWITGRHASVALRVSDHPLVR
ALCRLTGPLVSTSANPAGRPAARSRLRVEQYFPRRLDAVLGGALGGRRNPSLIRDLASGQ
VIRPA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcgattggcgggtgcgacaggtggcgcgggcggtgcgccggggcggggtgatc
gcttatccgaccgaggcggtctggggcctgggctgcgatccgtggaacgcggatgcggtg
cgccgcctgctggcgctcaagcggcggccgcaggacaagggcctgatcctggtcgccgcc
gacattggccagttcggcttcctgctcgacgacctgccgtcggcctggcgcgagcggctg
gccgggacctggccggggccgaacacctggctggtgccgcaccggggccgcctgccggca
tggatcaccggccgccacgcgagcgtcgccctgcgcgtcagcgaccatccgctggtgcgt
gcgctgtgccgtctcaccggcccgctggtgtccacctcggccaatcccgccggccgcccc
gccgcacgctcgcggctgcgcgtcgaacagtacttcccgcgccgcctggacgccgtgctc
ggcggcgccctgggcgggcggcgcaacccgagcctgatccgcgacctggccagcggccag
gtgatccgcccggcctag
DBGET
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