Achromobacter xylosoxidans NBRC 15126 = ATCC 27061: AX27061_0148
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Entry
AX27061_0148 CDS
T02964
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
axn
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Pathway
axn02020
Two-component system
axn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
axn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AX27061_0148
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AX27061_0148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
axn03021
]
AX27061_0148
Transcription machinery [BR:
axn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AX27061_0148
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
K-cyclin_vir_C
Motif
Other DBs
NCBI-ProteinID:
AHC44616
LinkDB
All DBs
Position
154794..156239
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AA seq
481 aa
AA seq
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MQNIVPMTRPILELRPGQHLTLTPQLQQSIRLLQLSTLELEAEISQVLADNPLLERDDEP
ASVETQAESERESSVQDDEPAPERDTPVEEMPGSGGVYPDDDSSLPEAARPDTLREHLLG
QLVLTRAAPRDAALAALLIDELDENGYLGSPLEEILGWLPAEMEPDLDELRAALSLLQSF
DPAGIGARDMSECLLLQLRSPDTARLPEAADPKALACARLVCAQHLALLATGNHARLCAA
VGCDEATLRAAHALILRLEPRPGRAWTVPAADYAVPDVIVRKTRRGWQVTLNSAAVPRLQ
INGLYAQMLANQKESAHAGLQSQLQQAKWMIRNVEQRFDTILRVAQAIVDRQTAFFSQGP
AAMRPLILKDIAGELGLHESTISRATTQKYMLTPFGTLELKRFFGAGVSTDGGDATSATA
VQTFIRQMVAEENRAKPLSDSQIMEKLADQGIVIARRTVAKYREALRIAPAALRKAQAAA
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatattgtacctatgacccgtcctattttagaactgcggcccggccagcatctg
acgctgacccctcaactgcagcaatcgatccggttgctgcagctgtccacgctcgagctc
gaggcggaaatctcgcaagtgctcgccgacaatccgttgctggaacgcgacgatgagcct
gcctccgtcgagacgcaggccgaatccgagcgcgagtcgtcggtgcaggacgacgaaccc
gcgcccgagcgcgacaccccggtcgaggaaatgccgggttcgggcggggtctaccccgat
gatgattccagcctgcccgaggccgcccggcccgataccctgcgcgagcacctgctcggg
caactggtgctgacccgcgccgcgccgcgcgacgccgcgctggcggcgctgctgatcgac
gaactggacgagaacggctacctgggctcgcccctggaggaaatcctgggctggctgccg
gccgagatggagccggacctggacgagctgcgcgccgcgctgtcgctgctgcaatcgttc
gacccggccggcatcggcgcgcgcgacatgtccgagtgcctgctgttgcaattgcgcagt
cccgacacggcccggttgcccgaggccgcggatcccaaggcgctggcctgcgcccgcctg
gtctgcgcccagcatctggcgctgttggccaccggcaaccatgccaggctgtgcgccgcg
gtcggttgtgacgaggccacgctgcgcgcggcgcacgccctgatcctgcgtctggagccc
cgtccgggccgcgcctggacggtcccggcggccgattacgccgtgcccgacgtcatcgtg
cgcaagacgcgccgcggctggcaggtgacgctcaacagcgccgccgtgccgcgactgcag
atcaatggcctgtacgcccaaatgctggccaaccagaaggagtcggcccacgccggcttg
cagtctcagctgcaacaggcgaaatggatgatccgcaacgtggagcagcgcttcgacacc
atcctgcgagtggcccaggccattgtcgaccgccagaccgccttcttcagccaggggccg
gcggccatgcgcccgctcatcctcaaggacattgccggcgagctgggcctgcatgagtcc
accatttcacgcgccacgacacagaagtacatgctcactcccttcggtacgctggagctc
aagcgcttcttcggggcgggggtgtcgaccgatggcggcgacgccacatccgccacggcg
gtgcagactttcatccgccagatggtggccgaggagaaccgggccaagccgctgtccgac
agccagatcatggaaaaactggccgatcagggcatcgtcatcgcccgcaggacggtcgcg
aaataccgcgaggcactgcggatcgcgccggccgcgctgcgcaaggcgcaggccgcggcg
cggtga
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