Burkholderia ambifaria MC40-6: BamMC406_0700
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Entry
BamMC406_0700 CDS
T00684
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac00260
Glycine, serine and threonine metabolism
bac00460
Cyanoamino acid metabolism
bac00630
Glyoxylate and dicarboxylate metabolism
bac00670
One carbon pool by folate
bac00680
Methane metabolism
bac01100
Metabolic pathways
bac01110
Biosynthesis of secondary metabolites
bac01120
Microbial metabolism in diverse environments
bac01200
Carbon metabolism
bac01230
Biosynthesis of amino acids
bac01240
Biosynthesis of cofactors
Module
bac_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BamMC406_0700
09102 Energy metabolism
00680 Methane metabolism
BamMC406_0700
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BamMC406_0700
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BamMC406_0700
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BamMC406_0700
Enzymes [BR:
bac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BamMC406_0700
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ACB63196
UniProt:
B1YTX3
LinkDB
All DBs
Position
1:786371..787666
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AA seq
431 aa
AA seq
DB search
MYSAAPVNLYTLNGNRMFDRAQSTIANVDPELFAAIEQENRRQEDHIELIASENYTSPAV
MAAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQ
GVFFAMLKPGDTIMGMSLAHGGHLTHGSPVNMSGKWFNVVSYGLNEQEDIDYDAAEQLAQ
EHKPKLIVAGASAFALKIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFV
TTTTHKSLRGPRGGVILMKAEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKA
YQEKVVENARVLAETLVKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGAAHITVNK
NAIPNDPEKPFVTSGIRLGSPAMTTRGFGPAEAELVGNLIADVLENPEDAATIERVRAQV
AELTKRFPVYR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggccgcaccggtcaacctgtacacacttaacggaaaccgtatgtttgacaga
gcccaaagcaccatcgcgaacgtcgatcccgaactctttgctgcgatcgagcaggaaaac
cgccgccaggaagatcacatcgagctgatcgcgtcggaaaactacacgagcccggccgtg
atggccgcccagggctcgcagctcacgaacaagtacgcggaaggttatccgggcaagcgc
tactacggcggctgtgaatacgtcgacgtggtcgagcagctggcgatcgaccgtgtgaag
cagctgttcggcgcggaagccgcgaacgtgcagccgaactcgggttcgcaggcgaaccag
ggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatgagcctggcgcac
ggcggtcacctgacgcacggctcgccggtgaacatgtcgggcaagtggttcaacgtggtg
agctacggtctgaacgagcaggaagacatcgactacgacgcggccgagcagctcgcgcag
gaacacaagccgaagctgatcgtcgcgggcgcgtcggcgttcgcgctgaagatcgacttc
gagcgtctggcgaagatcgcgaagtcggtgggtgcgtacctgatggtcgacatggcgcac
tacgcgggcctgatcgcggcgggcgtgtatccgaacccggtgccgcatgcggacttcgtg
acgacgacgacgcacaagagcctgcgcggcccgcgcggtggcgtgatcctgatgaaggcc
gagtacgagaagccgatcaactcggcgatcttcccgggcatccagggtgggccgctgatg
cacgtgatcgcggcgaaggccgtggcgttcaaggaagcgctgtcgccggaattcaaggcg
taccaggaaaaggtggtcgagaacgcgcgcgtgctggctgaaacgctggtcaagcgcggg
ctgcggatcgtgtcgggccgcaccgaaagccacgtgatgctggtggacctgcgcgcgaag
aacatcaccggcaaggctgcggaagcggcgctgggtgctgcacacatcacggtgaacaag
aacgcgatcccgaacgatccggaaaagccgttcgtgacgagcggcatccgtctgggttcg
ccggcgatgacgacgcgcggcttcggcccggcggaagccgaactggtcggcaacctgatt
gccgacgtgctcgagaacccggaagatgcggcgacgatcgagcgtgtgcgcgcgcaagtg
gccgagctgaccaagcgtttcccggtctatcgctga
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