Burkholderia ambifaria MC40-6: BamMC406_4861
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Entry
BamMC406_4861 CDS
T00684
Name
(GenBank) Lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac00330
Arginine and proline metabolism
bac01100
Metabolic pathways
bac01110
Biosynthesis of secondary metabolites
Module
bac_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
BamMC406_4861
Enzymes [BR:
bac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
BamMC406_4861
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
ACB67310
UniProt:
B1YZ13
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All DBs
Position
2:1999479..2001818
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AA seq
779 aa
AA seq
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MTATLTQPAFRRLGMKALLVQHDIDERTATGRAATALAEELRARLVDVVIATSAEDARAV
VDADPAIQCLLLNWELGNDPEHAPARAVLDAMRARNATVPVFLLASRASAAAIPVDAMRK
ADDFIWMLEDTTAFIGGRIVAAIERYRETVLPPMFRALAQFSRVYEYSWHTPGHTGGTAF
LKSPVGRAYFEFFGEALFRSDLSISVGELGSLLDHSGPIGESERYAARVFGAHRTYHVTN
GSSMSNRVILMASVTRNQVALCDRNCHKSAEHAMTMSGAIPTYLIPSRNHYGIIGPIMPE
RLTAAAVRLAVDANPLVRGRDGIDPTPVHALITNSTYDGLCYNVARVEELLGQSVDRLHF
DEAWYGYARFNPIYRDRHAMHGDPSQHDASKPTVFATQSTHKLLAALSQASFIHVRNGRN
PIEHARFNEAYMMHASTSPNYAIIASNDVSAAMMDGPGGEALTTDAIREAVSFRRMLARL
HAECEENNDWFFNGWQPDTVVDRKTGRRVRFHEADETLLATDPSCWVLHPGDTWHGFGEI
EDDYCMLDPIKVSIVTPGVAPHGGLMPVGIPASVVTAYLDRHGIVVEKTTDFTILFLFSL
GVTKGKWGTLVNTLLDFKRDYDANAPLEQALPDLVARYPDRYGKLGLRELCDLMFSAMSD
LKTTEMMSRGFSTLPQPDFSPAEAFEHLVHNDIEMLELSEMAGRTVATGVVPYPPGIPLL
MPGENAGPADGPLLGYLRALEQFDLRFPGFTHDTHGVEVEDGVYRIACIRQVDRKTNTR
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctaccttgacccaaccggcatttcgccgcctcggcatgaaggcgctgctcgtg
cagcacgacatcgatgaacgcacggccaccgggcgcgcagccaccgccctcgccgaagaa
ttgcgcgcacggctggtcgacgtcgtgatcgcgacgtccgccgaagacgcgcgcgcggtg
gtcgacgccgatcccgcgatccagtgcctgctgctcaactgggagctcggcaacgatccc
gagcatgcgcccgcgcgggccgtgctcgacgcgatgcgcgcgcgcaatgcgacggtgccg
gtgttcctgctcgcgagccgcgcgagcgcggccgcgattcccgtcgacgcgatgcgcaag
gccgacgacttcatctggatgctggaggacaccaccgcgttcatcggcgggcggatcgtc
gccgcgatcgaacgctatcgcgagaccgtgctgccgccgatgttccgcgcactcgcgcag
ttctcgcgcgtgtacgaatactcgtggcacacgccgggccatacgggcggcaccgcgttc
ctgaaatcgccggtcggccgcgcgtacttcgaattcttcggcgaagcgctgttccgctcg
gacctgtcgatctcggtcggcgaactcggctcgctgctcgaccactcgggcccgatcggc
gaaagcgaacgctacgcggcgcgcgtgttcggcgcgcaccgcacgtatcacgtgacgaac
ggctcgtcgatgtcgaaccgcgtgatcctgatggcgagcgtcacgcgcaaccaggtcgcg
ctgtgcgaccgcaactgccacaagtcggccgagcacgcgatgacgatgtcgggcgcgatt
ccgacctacctgatcccgtcgcgcaaccattacgggatcatcgggccgatcatgccggaa
cggctcacggccgccgccgtgcgcctcgcggtcgacgcgaatccgctcgtgcgcggccgc
gacggcatcgatccgacgcccgtgcatgcgctgatcacgaactcgacctacgacggcctc
tgctacaacgtcgcgcgcgtcgaggaattgctcggccagagcgtcgaccggctgcatttc
gacgaagcctggtacggctatgcgcgcttcaacccgatctaccgcgaccgtcacgcgatg
cacggcgatccgtcgcagcacgacgcgagcaagccgaccgtgttcgcgacgcaatcgacg
cacaagctgctcgccgcgctgtcgcaggcatcgttcatccatgtccgcaacggccgcaac
ccgatcgagcatgcacgtttcaacgaggcgtacatgatgcacgcgtcgacgtcgccgaac
tacgcgatcatcgcgtcgaacgacgtgagcgccgcgatgatggacggtcccggcggcgag
gcgctgacgaccgacgcgatccgcgaggccgtgtcgtttcgccggatgctcgcgcggctg
cacgcggaatgcgaggagaacaacgactggttcttcaacggctggcagccggacaccgtg
gtcgatcgcaagacgggccggcgcgtgcgcttccatgaagcggacgaaacgctgctcgcc
accgatccgtcatgctgggtgctgcatccgggcgacacctggcacggcttcggcgagatc
gaggacgactactgcatgctggacccgatcaaggtatcgatcgtcacgccgggcgtcgcg
ccgcacggcggcctgatgccggtcggcattccggcgtcggtcgtcacggcgtatctcgac
cggcacgggatcgtcgtcgagaagacgaccgacttcacgatcctgttcctgttctcgctc
ggcgtgacgaagggcaagtggggcacgctcgtcaacacgctgctcgacttcaagcgcgac
tacgacgcgaacgcgccgctcgaacaggcgctgccggacctcgtcgcgcgttatccggac
cgctacggcaagctcggcctgcgcgagctgtgcgacctgatgttcagcgcaatgagcgac
ctgaagacgaccgagatgatgtcgcgcggcttctcgacgctgccgcagcccgacttcagc
ccggccgaggcgttcgagcatctcgtgcacaacgacatcgagatgctcgagctgtcggag
atggccggccgcaccgtcgcgacgggcgtcgtgccctacccgcccggcattccgctgctg
atgcccggcgagaacgcggggccggccgacgggccgctgctcggctacctgcgggcgctc
gagcaattcgacctgcgcttccccggcttcacgcacgatacgcacggcgtcgaagtcgag
gacggcgtgtaccggatcgcctgcatccggcaagtcgatcgcaagaccaacacgcgctga
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