Balaenoptera acutorostrata scammoni (minke whale): 102997503
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Entry
102997503 CDS
T03086
Symbol
RPA1
Name
(RefSeq) replication protein A1
KO
K07466
replication factor A1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03030
DNA replication
bacu03420
Nucleotide excision repair
bacu03430
Mismatch repair
bacu03440
Homologous recombination
bacu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102997503 (RPA1)
03420 Nucleotide excision repair
102997503 (RPA1)
03430 Mismatch repair
102997503 (RPA1)
03440 Homologous recombination
102997503 (RPA1)
03460 Fanconi anemia pathway
102997503 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bacu03000
]
102997503 (RPA1)
03032 DNA replication proteins [BR:
bacu03032
]
102997503 (RPA1)
03400 DNA repair and recombination proteins [BR:
bacu03400
]
102997503 (RPA1)
Transcription factors [BR:
bacu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102997503 (RPA1)
DNA replication proteins [BR:
bacu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102997503 (RPA1)
DNA repair and recombination proteins [BR:
bacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102997503 (RPA1)
MMR (mismatch excision repair)
102997503 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
102997503 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
102997503
NCBI-ProteinID:
XP_007177536
UniProt:
A0A383ZQZ9
LinkDB
All DBs
Position
Un
AA seq
617 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTAIKPILQVINIRPIATGNNPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEERLSSNCICQINRFIVNTLKDGRRVIILMELEVLKSAEEVGLKIGNPVPYNE
GHGQQPVVPPPVSAASPPASRPQQQNGSSGVGTTVSKIFGASKTFGKPGGTSLGNTSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGIGDLESKSKDSLVDVIGICKSYEDVTKITVKSNNREVSKRNIYLMDMSGKVVNATL
WGEDADRFDGSRQPVMAIRGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ
ALAGVSISDLKSGGIGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
EYGRRLITSIRRNAAAM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagatacagcc
ataaaacccattctccaagtcattaacatccgtcccattgctacagggaataatccaccc
cgttatcgactgcttatgagtgatggattgaatactctgtcttctttcatgttggcaaca
cagttgaaccctcttgttgaggaagaacgattgtctagcaactgtatttgccagattaac
cgatttattgtgaacactctgaaagatggaaggagagtgattattttgatggagttagaa
gttttgaaatcagctgaagaagttggattaaagattggcaatccagtgccctataatgaa
gggcacggacaacagccagtagttcctcctccagtctcagcagcaagtccgccagccagc
aggccccagcaacagaatgggagctcgggagtgggtaccactgtatctaagatttttggt
gcctcaaagacatttggaaaacctggaggtaccagcctagggaacacctccgggggaaca
caggccaaagtggtacccattgccagcctcaccccttaccagtccaagtggactatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
cttttctctatagaactagttgatgagagtggcgaaatcagagcgactgctttcaatgag
caagtggacaagttctttcctcttattgatgtgaacaaggtctattacttctctaaaggc
accctgaagatcgccaacaaacaattcacagccgtcaaaaacgactatgagatgaccttc
aataatgagacttctgtcatgccctgtgaagatggtcatcatttacccacagttcagttt
gatttcacagggattggtgacctagagagcaagtctaaagactcacttgtagacgtaatc
gggatctgcaagagctatgaagatgtcactaaaatcacagtgaagtctaacaacagagaa
gtctctaagaggaatatctatttgatggacatgtcagggaaagtggtgaatgctactctg
tggggagaagatgctgatagatttgatggttctagacaacccgtgatggctatcagagga
gcgagagtttctgattttggtggacggagcctctctgtactgtcttcaagtaccgtcatt
gtgaaccctgacatcccagaggcctacaagcttcgtggatggtttgactcggaaggacaa
gccttagctggcgtttccatctctgatctaaagagtggaggaataggagggagcaacacc
aactggaaaactttatatgaggttaaatcagagaacttgggccaaggtgacaagcccgac
tattttagctctgtggcgacagtggtgtatcttcgcaaagagaactgtatgtaccaggcc
tgcccaactcaggactgcaataagaaagtgattgatcaacagaatggattgtaccgctgc
gaaaagtgtgacagtgaatttccgaatttcaagtaccgcatgatcctgtcagtaaatatt
gctgattttcaagagaatcagtgggtcacatgtttccaggagtctgcagaggccatcctt
ggacaaagcactgcttatcttggggagttaaaagagaagaacgagcaagcatttgaggaa
gttttccagaatgccaactttagatcttttacattcaggatcagggtcaaattggagacc
tacaatgatgagtctcgaattaaggccactgtgatggacgtaaagcccgtggactacaga
gagtatggcaggaggttgatcacgagcatcaggagaaacgccgcggcgatgtga
DBGET
integrated database retrieval system
