KEGG   Balaenoptera acutorostrata scammoni (minke whale): 103001858
Entry
103001858         CDS       T03086                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
bacu  Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bacu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103001858 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bacu03400]
    103001858 (TDP1)
DNA repair and recombination proteins [BR:bacu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     103001858 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 103001858
NCBI-ProteinID: XP_007186342
UniProt: A0A384AG67
LinkDB
Position
Un
AA seq 628 aa
MTRRALGPSCGHPGRGRGRATLRAPRPGAFEARAGASGGGGAGSPAAACSGGFRGSIMSQ
EGSYGRWTISSSDESEEEKPRPDEPSTSFLPHAEQGAASEAKYTCSEARKAAHRRKIAPV
KFSNAESVSEASPPKRQKGGSQEDLGWHLSSSEDELPPETQQQRAKDTGVKEEKGLPSPR
DGAVAGAGHHSPSAGHGLETSGEGQDIWDMLDKGNPFQFYLTRVSGIKPKYNSEALHIRD
ILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRAKLDIAFGTHHTKMMLLLYEEGLRVVI
HTSNLIHADWHQKTQGIWLSPLYPRIVHGTHRSGESTTHFKADLISYLMAYNAAPLKEWI
DTIQEHDLSETNVYLIGSTPGRFQGNQKDNWGHFRLRKLLKEHASSIPKAESWPIVGQFS
SVGSMGADESKWLCSEFKESLVTPGKESRTPGSAVPLHLIYPSVENVRTSLEGYPAGGSL
PYSIQTAEKQNWLHSYFHKWSADTSGRSNAMPHIKTYMRPSPDFSQLAWFLVTSANLSKA
AWGALEKNGAQLMIRSYELGVLFLPSAFGLDSFRVKQKFFSRSQEPTASFPVPYDLPPEL
YGSKDRPWIWNIPYVKAPDTHGNMWVPS
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgacccggagggctttaggacccagctgcgggcatcccggaaggggaaggggcagggcc
actctgcgcgcgccgcggcctggagcatttgaagcgcgcgcaggcgcgagtggcggcgga
ggagcggggtccccggcggctgcgtgttctgggggcttcagaggaagtataatgtctcag
gaaggcagttacgggaggtggacgatatccagtagtgatgaaagcgaggaggaaaagcca
agaccggacgagccatctacctcttttctcccgcacgctgagcagggagcagccagtgag
gcaaagtacacctgttccgaggctcggaaagctgcccacaggaggaagatcgcacccgtg
aaattcagcaacgcagagtccgtttcagaagcttcacctcccaaaaggcagaagggcggt
tcccaggaagacctgggctggcatctctccagcagtgaggatgagctgccaccagagacg
cagcagcagcgggctaaggacacgggagtcaaagaggagaaaggcctcccttctcccaga
gatggtgctgtcgcgggagctgggcatcacagcccctcggccggccacgggcttgaaacg
tcaggggaaggccaggacatctgggacatgctggataaagggaaccccttccaattttac
ctcactagagtctccggaattaagccaaagtataactcggaagccctccacataagggat
attttatctcctctatttgggacacttgtttcttcagctcagtttaactactgctttgat
gtggactggctcgtaaaacagtatccaccagagttcagggcaaagttggatattgcattt
ggaacacaccacacgaaaatgatgctactgctgtacgaagaaggcctccgggttgtcata
cacacctccaacctcattcacgccgactggcaccagaagacacaaggaatatggttgagc
cccttgtacccacgaatagtccatgggacccacagatctggagaatcaaccacacacttt
aaagctgacctcatcagctacttgatggcttataacgccgctcccctcaaggagtggata
gataccatccaggagcacgacctctcagaaacaaatgtttaccttattggctcaaccccg
ggacgctttcaaggaaatcaaaaagataactggggacattttaggcttaggaagcttctg
aaagagcatgcctcatccatacctaaagcagagtcctggcctatagtaggtcagttctca
agcgttggctccatgggggccgatgaatcaaaatggttgtgttctgagtttaaagagagc
ttggtgacaccgggcaaggaaagcaggaccccaggaagtgctgttcctctccatctgata
tatccttcagtggaaaacgtgcgaaccagcttagaaggatatccagctgggggctctctt
ccctatagcatccagacggcggagaaacagaattggctccattcctattttcacaaatgg
tcagccgacacgtcaggccgcagcaatgccatgccacatattaagacatatatgagaccc
tctccagacttcagtcaacttgcgtggttccttgtcacaagcgccaatctgtccaaggcc
gcctggggagcgttagagaagaacggcgcccagctgatgatccgctcctatgagctcggc
gtccttttcctcccatcagcatttggcctggacagtttcagagtgaaacagaaattcttc
tcaaggagccaggagccaacggcctcctttcctgtgccgtatgacctgcctccagaactg
tatggaagtaaagatcggccctggatttggaacattccttatgtcaaagcaccagataca
cacgggaacatgtgggttccctcctga

DBGET integrated database retrieval system